Gene Information

Name : SERP2528 (SERP2528)
Accession : YP_190069.1
Strain : Staphylococcus epidermidis RP62A
Genome accession: NC_002976
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2582598 - 2583893 bp
Length : 1296 bp
Strand : -
Note : identified by similarity to OMNI:NTL01SA0026

DNA sequence :
ATGAGACATAATATATTTTATAATAGGAGGGAATTTCAAATGATAGACAACTTTATGCAGGTCCTTAAATTAATTAAAGA
GAAACGTACCAATAATGTAGTTAAAAAATCTGATTGGGATAAAGGTGATCTATATAAAACTTTAGTCCATGATAAGTTAC
CCAAGCAGTTAAAAGTGCATATAAAAGAAGATAAATATTCAGTTGTAGGGAAGGTTGCTACTGGGAACTATAGTAAAGTT
CCTTGGATTTCAATATATGATGAGAATATAACAAAAGAAACAAAGGATGGATATTATTTGGTATATCTTTTTCATCCGGA
AGGAGAAGGCATATACTTATCTTTGAATCAAGGATGGTCAAAGATAAGTGATATGTTTCCGCGGGATAAAAATGCTGCAA
AACAAAGAGCATTAACTTTATCTTCCGAACTCAATAAATATATTACATCAAATGAATTTAATACTGGAAGATTTTATTAC
GCAGAAAATAAAGATTCATCTTATGATTTAAAAAATGATTATCCATCAGGATATTCTCATGGATCAATAAGATTCAAATA
TTATGATTTGAATGAAGGATTCACAGAAGAAGATATGCTAGAGGATTTAAAGAAATTTTTAGAACTATTTAATGAATTAG
CTTCAAAAGTTACAAAAACATCCTATGATAGCTTGGTCAATAGCATAGACGAAATACAGGAAGACAGCGAAATTGAAGAA
ATTAGAACAGCACAAAAAGATAAGACACTCAAGGAAGTGGAAGCACCTAAAGGAATAATTCCAAAATATAAAAAAGGTGT
ATCAAAGACTACTAAAAATGATTCAGAAATTGAAAAATCAAATAAAGAGAATAAATTAACCGGTAAAGTTGGAGAAAAAT
TAGCGCTAAATTACTTTAATGAGCTAATTGATAATAAAATAGACGAAGATAAGAAAGAACAGTTTAGGAATATTTTAAAT
GATAATCCAGGCTCTCAACACGGTCATGGCTATGATTTAGTAGCTTTTGATCCAACAAATACAGATAAAGCTGTAGAAAA
ATTTATTGAAATTAAAACATCTACATCTTCTAGTATTGAGGAACCATTTTTTATGTCGCTAAATGAAATGTTTGCTATGA
AAGAATATAAGCAGAAATATTTAATATTAAGAATATTTAATGTTTCCGGTAAAGAACCACAATTTTATTTTATAGATCCA
TATGCAAATTATTCTGAATTTAAAGATGTAGATGATCTCATTGACAAAGTATTTAATGTAGAAGCTATTCAGTATAAAGT
TTTTGGCGAAAAATGA

Protein sequence :
MRHNIFYNRREFQMIDNFMQVLKLIKEKRTNNVVKKSDWDKGDLYKTLVHDKLPKQLKVHIKEDKYSVVGKVATGNYSKV
PWISIYDENITKETKDGYYLVYLFHPEGEGIYLSLNQGWSKISDMFPRDKNAAKQRALTLSSELNKYITSNEFNTGRFYY
AENKDSSYDLKNDYPSGYSHGSIRFKYYDLNEGFTEEDMLEDLKKFLELFNELASKVTKTSYDSLVNSIDEIQEDSEIEE
IRTAQKDKTLKEVEAPKGIIPKYKKGVSKTTKNDSEIEKSNKENKLTGKVGEKLALNYFNELIDNKIDEDKKEQFRNILN
DNPGSQHGHGYDLVAFDPTNTDKAVEKFIEIKTSTSSSIEEPFFMSLNEMFAMKEYKQKYLILRIFNVSGKEPQFYFIDP
YANYSEFKDVDDLIDKVFNVEAIQYKVFGEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SERP2528 YP_190069.1 hypothetical protein Not tested Type-II SCCmec Protein 0.0 100
unnamed BAA94339.1 hypothetical protein Not tested Type-I SCCmec Protein 0.0 100
SAMSHR1132_00260 YP_005324550.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 6e-176 100
unnamed BAA82240.2 - Not tested Type-II SCCmec Protein 0.0 100
MW0025 NP_644840.1 hypothetical protein Not tested Type-IV SCCmec Protein 6e-176 100
SAUSA300_0027 YP_492747.1 hypothetical protein Not tested Type-IV SCCmec Protein 6e-176 100
SACOL0026 YP_184937.1 hypothetical protein Not tested Type-I SCCmec Protein 0.0 100
SAR0025 YP_039502.1 hypothetical protein Not tested Type-II SCCmec Protein 0.0 100
SAV0025 NP_370549.1 hypothetical protein Not tested Type-II SCCmec Protein 0.0 100
SA0024 NP_373263.1 hypothetical protein Not tested Type-II SCCmec Protein 0.0 100
SAS0048 YP_042177.1 hypothetical protein Not tested SCC476 Protein 3e-173 94