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Name : xylR (SERP2517) Accession : YP_190058.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : xylose repressor Function : - COG functional category : K : Transcription COG ID : COG1940 EC number : - Position : 2572811 - 2573920 bp Length : 1110 bp Strand : - Note : identified by similarity to GP:14020995; match to protein family HMM PF00480 DNA sequence : GTGCTAAGGGAAATTTATAACCATCATAATATTTCGCGTACTCAAATATCTAAAAATCTTGAGATTAATAAGGCAACGAT TTCTAGTATTTTGAATAAGTTAAAGTATAAATCTCTTGTTAATGAGGTTGGTGAGGGTGATAGCACGAAGAGTGGTGGTA GAAAACCTATTCTTCTGAAGGTTAATCATCTTTATGGTTATTTTATTTCTTTGGATTTAACTTATAGTTCTGTTGAAGTG ATGTACAATTATTTTGATGGTAATGTCATTAAGCATGAATCTTATGATTTACCTGATGAAAAGGTTAGTAGTATATTAAG CATAATAAAAAAACATATTGATATTCAGGAGAAACTTGATACTTATAACGGACTATTAGGTGTGTCTGTTTCTATACATG GAGTTGTGGATAATGAGCAGCATGTGACATATTTACCATTCCATGAAACTGAAGGAATTTCAATTGCTAAGAAAATAAAA GAAATTACTAATGTTCCAGTCGTAGTTGAAAATGAAGCGAATCTTTCAGCGTTATATGAACGTAATTTTAATCATAATTT ATCCTACAATAATCTTATTGCTTTAAGTATACATAAAGGTATTGGTGCTGGGCTTATTATTAATAATCAATTGTATCGTG GTGCAAATGGGGAAGCGGGTGAAATTGGAAAAACACTTGTCTCAAAAGTTAGCGATAATGTGGAGATCTTTCATAAGATT GAAGATATTTTTTCACAAGAAGCTTTACTGCATAATTTAAGTAATCAACTAAATGAGAAGATGACGCTTAGCAAATTAAT TCAATTTTATAATGAAAAAAATCCAGTCGTAGTTGAAGAAATGGAACAATTTATAAATAAAATTGCTGTTTTAATACATA ATTTAAACACCCAGTTTAATCCGAATGCAATTTACATTAACTGTCCATTGTTCAATGAAATGCCTGAAATATTAGAAGCA ATTAAGAACCAGTTCAAACAATATTCACGTAACGAAATTCAAATAAAGTTAACATCTAATGTCAAATTTGCAACTTTGCT AGGTGGTACATTAGCAATTATCCAAAAAGTACTACAGATTAATGATATTTACTTAGATATAAAAGCATAA Protein sequence : MLREIYNHHNISRTQISKNLEINKATISSILNKLKYKSLVNEVGEGDSTKSGGRKPILLKVNHLYGYFISLDLTYSSVEV MYNYFDGNVIKHESYDLPDEKVSSILSIIKKHIDIQEKLDTYNGLLGVSVSIHGVVDNEQHVTYLPFHETEGISIAKKIK EITNVPVVVENEANLSALYERNFNHNLSYNNLIALSIHKGIGAGLIINNQLYRGANGEAGEIGKTLVSKVSDNVEIFHKI EDIFSQEALLHNLSNQLNEKMTLSKLIQFYNEKNPVVVEEMEQFINKIAVLIHNLNTQFNPNAIYINCPLFNEMPEILEA IKNQFKQYSRNEIQIKLTSNVKFATLLGGTLAIIQKVLQINDIYLDIKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylR | YP_190058.1 | xylose repressor | Not tested | Type-II SCCmec | Protein | 4e-169 | 100 |
| xylR | NP_370568.1 | xylose repressor-like protein | Not tested | Type-II SCCmec | Protein | 2e-168 | 99 |
| xylR | NP_373281.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 8e-169 | 99 |
| xylr | BAB47619.1 | xylose repressor | Not tested | Type-III SCCmec | Protein | 7e-169 | 99 |
| xylr | BAC57480.1 | xylose repressor | Not tested | Type-IIIinv SCCmec | Protein | 7e-169 | 99 |
