Name : tnpA-3 (SERP2506) Accession : YP_190048.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : transposase A Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 2562543 - 2563628 bp Length : 1086 bp Strand : + Note : identified by similarity to EGAD:7942; match to protein family HMM PF00589; match to protein family HMM PF02899 DNA sequence : GTGAAGGTTCAAAGGATAGAAGTGGAGAATAAGCCGTATCCATTGTATTTATTACTAGATAAAGAATACCAGCTAATAGA ACCAGTAATGAAATTTATTAAATACTTAGATAATACTGGTAAGTCTCCTAATACCATTAAGGCATACTGCTATCATTTAA AGTTGCTGTACGAGTTCATGGAACAGAGAGGTGTTATTCTTAATGATATTAACTTTGAGTTGTTAGCAGACTTCGTAGGT TGGTTGAGATATCCTTCAGCATCAAATGTAATTGATCTTCAGTCAAAAAAAGCCATAAGAGAAGAAACGACAGTGAATAC AATTTTAAATGTAGTTATGAGTTTTCTTGATTATTTAAGTAGATTAGGAGAATTTAAATCAATTGATGTATTTAAACAAG CAAAGGGAAGAAATTTCAAAGGATTTTTACATCATGTTAATAAGGGTAGATACCAAAAGAATGTCTTAAAGTTAAGGGTT AAAAAGAAACAGATAAGAACATTGAGATCAAAGGAAGTTAAGCAAATTATTGATGCTTGTCATACGAAAAGAGATAAATT AATTTTAATGCTTATGTATGAGGGTGGTTTAAGAATCGGTGAAGTGTTATCGCTTAGGCTTGAAGATATTGTCACTTGGG ACAATCAAATCCATTTAACACCTAGAGATGTTAATGTTAATGAAGCTTATATTAAATTAAGGAAGGAAAGAACAATACAT GTGAGTAAAGAACTTATGTCACTTTATACAGATTACTTGATATATGAGTATAGTGAGGAATTGGAGCATGATTATGTTTT TATTTCCTTAAAAGAAGGCTATTTTGGGAAACCACTAAAGTACCAAAGTGTTCTTGATCTAGTTAGAAGAATAGTTAAAA GGACTGGAATAGAATTTACATCACATATGCTTCGCCACACTCACGCAACGCAGCTAATTAGGGAAGGATGGGATGTTGCG TTCGTTCAAAAGAGATTAGGTCACGCACATGTTCAGACAACGTTAAATACCTATGTTCATCTTTCAGATCAGGATATGAA AAATGAGTTTAATAAATACCTCGAGAGAAAGGAGCATAAGAAATGA Protein sequence : MKVQRIEVENKPYPLYLLLDKEYQLIEPVMKFIKYLDNTGKSPNTIKAYCYHLKLLYEFMEQRGVILNDINFELLADFVG WLRYPSASNVIDLQSKKAIREETTVNTILNVVMSFLDYLSRLGEFKSIDVFKQAKGRNFKGFLHHVNKGRYQKNVLKLRV KKKQIRTLRSKEVKQIIDACHTKRDKLILMLMYEGGLRIGEVLSLRLEDIVTWDNQIHLTPRDVNVNEAYIKLRKERTIH VSKELMSLYTDYLIYEYSEELEHDYVFISLKEGYFGKPLKYQSVLDLVRRIVKRTGIEFTSHMLRHTHATQLIREGWDVA FVQKRLGHAHVQTTLNTYVHLSDQDMKNEFNKYLERKEHKK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tnpA | BAC57491.1 | transposaseA | Not tested | Type-IIIinv SCCmec | Protein | 2e-170 | 100 |
unnamed | BAA82201.1 | transposaseA | Not tested | Type-II SCCmec | Protein | 2e-170 | 100 |
tnpA1 | YP_039526.1 | transposase A 1 | Not tested | Type-II SCCmec | Protein | 2e-170 | 100 |
tnpA | NP_370580.1 | transposase A | Not tested | Type-II SCCmec | Protein | 2e-170 | 100 |
tnpA | NP_373292.1 | transposase A for Tn554 | Not tested | Type-II SCCmec | Protein | 2e-170 | 100 |
tnpA-3 | YP_190048.1 | transposase A | Not tested | Type-II SCCmec | Protein | 2e-170 | 100 |
tnpA | BAB47667.1 | transposase A(Tn554) | Not tested | Type-III SCCmec | Protein | 2e-170 | 100 |
tnpA | BAC53829.1 | transposase A(Tn554) | Not tested | SRImec-III and SCCmec-III region | Protein | 2e-170 | 100 |