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Name : SERP2505 (SERP2505) Accession : YP_190047.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : RadC domain-containing protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2003 EC number : - Position : 2562107 - 2562424 bp Length : 318 bp Strand : + Note : identified by match to protein family HMM PF04002 DNA sequence : ATGAAGGAAATCAATATTGTTTCACTACAAATGATAAAAACAGATACATTAAGTTATCTAAAAAATCGTATTTCAAACCC TGAGGATGCGGCAGAAATCATGCGTTCATTCATTGGAAACAGTGACCGAGAGCATCTCATTCTCATATGTATGAACAGTA AAAATGAACCTACACATATTCAAACACTATCGATTGGATCTATTAACCAAACGGTGATTCACCCTAGAGAAATATTCAAA ACAGCGATACTCAGTAACGCAAATAGTATAATGCTCGGTCATAATCATCCAAGTGGAGATGTATTAACCATAGTATAA Protein sequence : MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEIMRSFIGNSDREHLILICMNSKNEPTHIQTLSIGSINQTVIHPREIFK TAILSNANSIMLGHNHPSGDVLTIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| truncated-radC | NP_370581.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 2e-44 | 100 |
| radC | NP_373293.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 2e-44 | 100 |
| SERP2505 | YP_190047.1 | RadC domain-containing protein | Not tested | Type-II SCCmec | Protein | 2e-44 | 100 |
| unnamed | BAB47668.1 | hypothetical protein | Not tested | Type-III SCCmec | Protein | 5e-44 | 99 |
| unnamed | BAC53830.1 | hypothetical protein | Not tested | SRImec-III and SCCmec-III region | Protein | 5e-44 | 99 |
| unnamed | BAB46978.1 | hypothetical protein | Not tested | Type-IIIinv SCCmec | Protein | 1e-43 | 98 |
| unnamed | BAB47605.1 | hypothetical protein | Not tested | Type-III SCCmec | Protein | 2e-35 | 74 |
