Gene Information

Name : SERP2479 (SERP2479)
Accession : YP_190022.1
Strain : Staphylococcus epidermidis RP62A
Genome accession: NC_002976
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0515
EC number : -
Position : 2536600 - 2538108 bp
Length : 1509 bp
Strand : -
Note : identified by similarity to OMNI:NTL01SA0084; match to protein family HMM PF00069

DNA sequence :
TTGAATGAAGAAATCTTACGCGAAGTAGCAGATATTTTTATAGGTGATGACAGAGATAGCATTTATGATTATAAAACTGG
GAACGAATTAGTGAGGTTTTTTAATCATTACTTTAATAAAGGGGACATATATCAGGCTCCGTTTCCATCTAGATGGCTAT
ATGTTGTGAAACATTTGCAAACTCTGATTCAGGAGAGAAAGATCAATCAATTTTTCACATTAATTTTAAGCAATCACTAT
ATTAAGTATGAACTGAAAATTGACGAGGTTGAAGCAGCAAAGCAGGCTGCTAAAGCACTTAAGTTGTTCAACAAAAGATT
AAATCATTATGGGTACTACATAACAGGAACTAACAATGCTAGATATTTTATGGATAAGGATGAAGATACGGAGTCTATTG
GTTATGGAGGGTATGCGAATATTTATTTACAGAAGTCTACAGGTCTTGCTGTAAAAAAATTGAAAGAGGAGTATCTTACT
GATTCTTCAATTAAAAGTAGGTTTAAGAGAGAATTTGATCTCACTAAATCTTTTGATACAAATCCATTGTTCATTAATGT
GTTTGAATTTAATGAATCAGATTATTCATACACGATGGAGTTAGCTGATGAAACTTTGAAAGATTACATTGAAAGCAAGA
CAATTAGTGAGCTAGAAAAAGTAAAGATAATAATGAAAATTTTAAAAGCGATGAGTCAAGCACATAGTGAAAATAAAATA
CACAGAGATATCAGTTCTAAAAATGTATTAATGTTTAGAGGAAAAGTCAAAATATCAGACTTAGGATTAGGTAAAAACCT
TGATGAAATTCATTCGCATCAAACCTTTGATACAAACGGTGTAGGACAATATAAATACTGTGCACCGGAACAGATGTATA
GTTTAAAACAAGCAGATAAACAATCTGATGTTTTTAGTTTAGGAAGATTGATAAATTTTATTATGACTGGAAATGTAGTT
AACAACCATCACCTATTTAGAGGTGTATCTGATAAGGCTACGAACAGTAGTAAAGAATACAGATTTGAAGATGCAAATGA
AATGTTGAAAATGCTGCAGAGAATTTTAGAGTATCACAGTAGTGCAAAGCACGTCGAAAAATGTCAAGAAAAGCTGAAAA
GAGGAGTGTTTGATGATGAAAGCGAAGAATTTATTATGACACGAAGTGATGAACAATTATGTCAAATGGTTCTAAGTTCT
AATAATAATGAGCAAGCGTGTTTAATTCGTTATATGCAAAAAAACGAATCTTCAGCATGTGATTTAATAGAGAGTATTAA
TAGAAAGTATCAAGAGTTTTGTGGAAGGTTTGAAGACTACGATCCTTTTGCTAAATTAGCATATATGATTTTATGTAATA
ACTTCAGTTATAGAGTGAATGAAACAGCAGCTAGAGTGCTAAATTATGTTGCTTGGTCTGTAAATAGATTTTCGGCACAA
GACTTAATTAAAGGTTTAATTAATAGAGGAGTGGAGCCTTTGATTGAAGAAAAATTAAAGGACAATTAA

Protein sequence :
MNEEILREVADIFIGDDRDSIYDYKTGNELVRFFNHYFNKGDIYQAPFPSRWLYVVKHLQTLIQERKINQFFTLILSNHY
IKYELKIDEVEAAKQAAKALKLFNKRLNHYGYYITGTNNARYFMDKDEDTESIGYGGYANIYLQKSTGLAVKKLKEEYLT
DSSIKSRFKREFDLTKSFDTNPLFINVFEFNESDYSYTMELADETLKDYIESKTISELEKVKIIMKILKAMSQAHSENKI
HRDISSKNVLMFRGKVKISDLGLGKNLDEIHSHQTFDTNGVGQYKYCAPEQMYSLKQADKQSDVFSLGRLINFIMTGNVV
NNHHLFRGVSDKATNSSKEYRFEDANEMLKMLQRILEYHSSAKHVEKCQEKLKRGVFDDESEEFIMTRSDEQLCQMVLSS
NNNEQACLIRYMQKNESSACDLIESINRKYQEFCGRFEDYDPFAKLAYMILCNNFSYRVNETAARVLNYVAWSVNRFSAQ
DLIKGLINRGVEPLIEEKLKDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SERP2479 YP_190022.1 hypothetical protein Not tested Type-II SCCmec Protein 0.0 100
unnamed BAA82176.3 - Not tested Type-II SCCmec Protein 0.0 100
SAR0079 YP_039546.1 protein kinase Not tested Type-II SCCmec Protein 0.0 100
SAV0081 NP_370605.1 hypothetical protein Not tested Type-II SCCmec Protein 0.0 100
SA0077 NP_373318.1 hypothetical protein Not tested Type-II SCCmec Protein 0.0 100