|
Name : SERP2438 (SERP2438) Accession : YP_189983.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Resistance Product : cation transporter E1-E2 family ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 2494421 - 2496484 bp Length : 2064 bp Strand : - Note : identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525 DNA sequence : TTGAATAATAATGGTGAAGCGCATAATCATCAAAATCACATGAATCATTCTAATCAAATGCATCATGATAACCATGAATC ACATAATCATCATAGTGGCCATGCACATCATCATGGAAATTTTAAAGTTAAGTTTTTTGTTTCATTAATTTTTGCAATAC CTATCATTCTTTTATCGCCACTGATGGGTGTTAACTTACCTTTTCAATTCACATTTCCAGGTTCTGAATGGGTAGTGTTA ATATTAAGTACAATTTTATTCTTTTATGGTGGTAAACCGTTCTTGTCTGGTGGTAAAGATGAAATTGCTACAAAAAAACC AGGTATGATGACCTTAGTTGCCCTAGGTATTTCAGTAGCTTATATTTATAGCTTGTATGCTTTTTATATGAATAACTTTA GTAGTGCCACTGGTCATACAATGGACTTTTTTTGGGAATTAGCAACCTTAATTTTAATTATGCTATTAGGACATTGGATA GAAATGAATGCTGTCGGAAATGCTGGAGATGCTTTAAAGAAAATGGCAGAACTGTTACCTAATAGTGCTATTAAAGTTAT GGATAATGGCCAACGCGAAGAAGTTAAAATATCAGACATCATGACTGATGATATCGTCGAAGTAAAAGCCGGAGAAAGCA TTCCAACAGATGGTATTATCGTTCAAGGACAAACATCTATAGATGAATCCCTAGTCACTGGAGAATCTAAAAAAGTACAA AAAAATCAAAATGACAACGTCATCGGGGGTTCTATTAATGGGTCTGGAACAATACAAGTCAAGGTTACAGCTGTTGGAGA AGATGGATATCTTTCTCAAGTTATGGGACTTGTTAATCAAGCACAAAATGATAAATCTAGTGCTGAATTGTTATCTGATA AAGTGGCGGGTTATTTATTCTACTTTGCTGTAAGTGTTGGCGTGATTTCTTTTATTGTCTGGATGCTCATTCAAAATGAT GTTGATTTTGCATTAGAACGTCTTGTAACTGTGTTAGTCATTGCTTGTCCACATGCTTTAGGCTTGGCAATACCTTTAGT CACTGCACGTTCTACTTCAATTGGTGCACATAATGGTTTAATTATTAAAAATAGAGAGTCTGTAGAAATAGCTCAACATA TCGATTATGTAATGATGGATAAGACTGGTACTTTAACTGAGGGTAACTTTTCTGTGAATCATTATGAGAGCTTTAAAAAT GATTTGAGTAATGATACAATACTAAGCCTTTTCGCCTCATTAGAAAGTCAATCTAATCACCCATTAGCTATAAGTATTGT TGATTTTGCGAAAAGTAAAAATGTTTCATTTACTAATCCACAAGACGTTAATAATATTCCAGGTGTCGGATTAGAAGGTC TAATTCATAATAAAACATATAAAATAACAAATGTCTCTTATCTTGATCAGCACGGATTTGAATATGACAATGACTTATTT ATAAAATTAGCTCAACAAGGTAATTCAATCAGCTATTTAATTGAGGATCAACAAGTCATTGGCATGATTGCTCAAGGAGA TCAAATTAAAGAAAGCTCAAAACAAATGGTAGCTGATTTACTATCAAGAAATATTACACCAGTCATGCTTACAGGTGACA ATAATGAAGTGGCACACGCTGTCGCAAAAGAATTAGGTATTAGTGATGTCCATGCACAACTCATGCCAGAAGATAAGGAA AGCATTATAAAAGATTATCAAAGTAACGGTAATAAAGTCATGATGGTCGGAGACGGTATCAACGATGCGCCGAGCCTTAT AAGAGCCGATATTGGTATAGCAATTGGTGCAGGCACAGATGTTGCAGTGGATTCAGGTGATATCATACTTGTTAAAAGTA ATCCATCAGATATCATTCATTTCTTGACTCTTTCAAATAATACTATGAGAAAAATGGTTCAAAACTTATGGTGGGGTGCA GGTTATAATATTGTTGCTGTACCTTTAGCAGCTGGTATTTTAGCATTTATCGGCTTGATTTTATCACCTGCAATAGGTGC TATTTTAATGTCATTAAGTACGGTTATCGTTGCAATTAATGCCTTTACATTAAAATTGAAATAA Protein sequence : MNNNGEAHNHQNHMNHSNQMHHDNHESHNHHSGHAHHHGNFKVKFFVSLIFAIPIILLSPLMGVNLPFQFTFPGSEWVVL ILSTILFFYGGKPFLSGGKDEIATKKPGMMTLVALGISVAYIYSLYAFYMNNFSSATGHTMDFFWELATLILIMLLGHWI EMNAVGNAGDALKKMAELLPNSAIKVMDNGQREEVKISDIMTDDIVEVKAGESIPTDGIIVQGQTSIDESLVTGESKKVQ KNQNDNVIGGSINGSGTIQVKVTAVGEDGYLSQVMGLVNQAQNDKSSAELLSDKVAGYLFYFAVSVGVISFIVWMLIQND VDFALERLVTVLVIACPHALGLAIPLVTARSTSIGAHNGLIIKNRESVEIAQHIDYVMMDKTGTLTEGNFSVNHYESFKN DLSNDTILSLFASLESQSNHPLAISIVDFAKSKNVSFTNPQDVNNIPGVGLEGLIHNKTYKITNVSYLDQHGFEYDNDLF IKLAQQGNSISYLIEDQQVIGMIAQGDQIKESSKQMVADLLSRNITPVMLTGDNNEVAHAVAKELGISDVHAQLMPEDKE SIIKDYQSNGNKVMMVGDGINDAPSLIRADIGIAIGAGTDVAVDSGDIILVKSNPSDIIHFLTLSNNTMRKMVQNLWWGA GYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINAFTLKLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SERP2438 | YP_189983.1 | cation transporter E1-E2 family ATPase | BAC0079 | Protein | 6e-179 | 57 |
| SERP2438 | YP_189983.1 | cation transporter E1-E2 family ATPase | BAC0383 | Protein | 1e-144 | 49 |
| SERP2438 | YP_189983.1 | cation transporter E1-E2 family ATPase | BAC0629 | Protein | 5e-127 | 46 |
