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Name : arsB (SERP2430) Accession : YP_189975.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 2488050 - 2489339 bp Length : 1290 bp Strand : + Note : identified by match to protein family HMM PF02040; match to protein family HMM TIGR00935 DNA sequence : ATGACAATATTAGCAATCACAATTTTTATATTAACGTTAATTTTTGTTATATGGCAACCTAAAGGTCTAGATATTGGTAT TACTGCATTAATTGGTGCTGTAGTTGCTATAATCACTGGCGTTGTAAGCTTTTCAGATGTACTAGAAGTTACTGGAATTG TTTGGAATGCGACCTTAACTTTTGTTGCAGTTATTCTCATTTCACTCATATTAGATGAAATTGGGTTCTTTGAATGGTCT GCTATACATATGGTGAGAGCATCAAAAGGTAATGGCTTGAAAATGTTTGTTTACATTATGTTGTTAGGCGCTATTGTAGC AGCTTTCTTTGCGAACGATGGTGCGGCTTTAATACTGACACCTATTGTTTTAGCAATGGTACGTAGTTTAGGATTTGATA AAAAAGCGGTATTCCCATTTATTATTGCTAGTGGTTTTATTGCAGATACTACGTCTCTTCCATTAATTGTTAGTAATTTA GTTAATATTGTTTCTGCTGATTACTTTGATATTGGATTTGTTGAGTACTTCAGTAAAATGATTATACCTAATATATTCTC TTTAATCGCAAGTATTCTTGTCTTATGGCTTTATTTTAGAAAATCTATCCCAAGAAAATTTGATGCAGTAAATATTAGAG AGCCAAAAGAAGCGATTAAGGACAAAAAGCTTTTTAATATCTCGTGGATTGTACTCACTGTATTGCTAGTTGGTTATTTA ATAAGTGAGTTTATAAATATTCCAGTATCAATTATTGCTGGTATCATTGCTTTAATATTTGTATTATTAGCACGTAAATC TAAGGCTGTTCATACGAAACAAGTAATTAAAGGTGCACCATGGAATATTGTTTTATTCTCTATTGGTATGTATCTTGTGG TATTTGGTCTAAAAAATGTGGGGATTACAACGCTTCTTGGTGATGTACTAACAAATATTTCAAGTTACGGCTTATTTAGT AGTATCATGGGCATGGGCTTTATATCCGCATTCCTTTCATCCATTATGAACAACATGCCAACTGTTTTAATAGATGCAAT AGCGATTGGTCAATCTCAAACAACAAGCATACTCAAGGAAGGCATGATTTATGCGAATGTTATCGGATCTGATTTAGGAC CTAAAATCACACCAATTGGTTCGTTAGCAACACTTCTCTGGTTACATGTGCTTACTCAAAAAGGTGTTAAAATTTCTTGG GGACAATACTTTAAAATCGGTATTATTATAACGATTCCGGTATTATTTATCACACTGTTAGGGTTATATCTAACACTTAT TATTTTCTAA Protein sequence : MTILAITIFILTLIFVIWQPKGLDIGITALIGAVVAIITGVVSFSDVLEVTGIVWNATLTFVAVILISLILDEIGFFEWS AIHMVRASKGNGLKMFVYIMLLGAIVAAFFANDGAALILTPIVLAMVRSLGFDKKAVFPFIIASGFIADTTSLPLIVSNL VNIVSADYFDIGFVEYFSKMIIPNIFSLIASILVLWLYFRKSIPRKFDAVNIREPKEAIKDKKLFNISWIVLTVLLVGYL ISEFINIPVSIIAGIIALIFVLLARKSKAVHTKQVIKGAPWNIVLFSIGMYLVVFGLKNVGITTLLGDVLTNISSYGLFS SIMGMGFISAFLSSIMNNMPTVLIDAIAIGQSQTTSILKEGMIYANVIGSDLGPKITPIGSLATLLWLHVLTQKGVKISW GQYFKIGIIITIPVLFITLLGLYLTLIIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 2e-168 | 99 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 3e-151 | 89 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 9e-149 | 88 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 2e-102 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| arsB | YP_189975.1 | arsenical pump membrane protein | BAC0574 | Protein | 3e-154 | 91 |
| arsB | YP_189975.1 | arsenical pump membrane protein | BAC0575 | Protein | 8e-160 | 91 |
| arsB | YP_189975.1 | arsenical pump membrane protein | BAC0576 | Protein | 8e-101 | 59 |
| arsB | YP_189975.1 | arsenical pump membrane protein | BAC0578 | Protein | 2e-101 | 59 |
| arsB | YP_189975.1 | arsenical pump membrane protein | BAC0031 | Protein | 6e-99 | 58 |
| arsB | YP_189975.1 | arsenical pump membrane protein | BAC0577 | Protein | 1e-99 | 57 |
