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Name : SERP2364 (SERP2364) Accession : YP_189912.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 2410022 - 2411239 bp Length : 1218 bp Strand : + Note : dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simi DNA sequence : ATGACTGTATTGAGTGAGCAAGACAAAATAAGATTATTAGCTGATATCGTCAAGATTCAAACTGAGAATGATCATGAAAT TGAAGTATGTGAGTACTTAAAAGACCTGTTAAGTCAATATGATATTGATTCTAAGATTGTTAAAGTTAATGATTCACGCG CTAATTTAGTTGCTGAAATTGGTAGTGGCGCTCCAGTCTTAGCAATCAGTGGACACATGGATGTTGTAGATGCTGGTGAC CATGATGATTGGACTTTTCCTCCATTTGAACTCACAGATAAGGATGGCAAGTTATTCGGCAGAGGTACCACTGACATGAA AGGTGGTCTTATGGCGATGGTCATCGCGATGATTGAATTGAAACAATCAAACGCATTAAAGCAAGGTACGATACGTTTAT TAGCTACTACAGGAGAAGAAACGGAACAATATGGTGCACAATTACTTGCTGATGAAGGTTACTTAGATGATGTGAGTGGT TTAATTATTGGCGAACCAACTAGTAATATCGCTTACTATGCTCATAAAGGTTCTATGAGCTGTGTAGTCACAGCGAAAGG TAAGGCTGCACATAGTTCTATGCCACACCTAGGTACAAATGCTGTTGATATTTTAGTTGATTTTGTAAATGAAATGAAAC AAGAATATAAAAATATTAAAGAGCATGATAAAGTACATGAGCTAGACGCTGTTCCAATGATTGAGAAACATCTCCATAGA AAAATTGGTGAAGAAGAATCACATATCTACTCTGGATTTGTAATGTTAAACTCTGTTTTCAATGGTGGTAAACAAGTTAA TTCTGTTCCTCATAAAGCGACAGCTAAATATAATGTAAGAACTGTTCCAGAGTATGACAGTACTTTCGTGAAGGATTTAT TTGAAAAAGTCATTCGTCATGTGGGTGAAGATTATTTAACTGTAGATATACCTAGCAGTCATGATCCAGTGGCAAGTGAT CGTGATAATCCTCTTATTCAAAATATTACACGTATTGCACCGAATTATGTACATGAAGACATTGTTGTGAGTGCATTGAT TGGTACAACTGATGCATCTAGTTTCCTAGGAACAAATGAAAATAACGTAGATTTTGCTGTCTTTGGACCTGGTGAATCTA TTATGGCGCATCGAGTTGATGAATTTATTAGAAAAGATATGTATTTAAGTTATATTGATGTTTATAAAGATGTATTTAAA GCATATCTAGAAAAATAA Protein sequence : MTVLSEQDKIRLLADIVKIQTENDHEIEVCEYLKDLLSQYDIDSKIVKVNDSRANLVAEIGSGAPVLAISGHMDVVDAGD HDDWTFPPFELTDKDGKLFGRGTTDMKGGLMAMVIAMIELKQSNALKQGTIRLLATTGEETEQYGAQLLADEGYLDDVSG LIIGEPTSNIAYYAHKGSMSCVVTAKGKAAHSSMPHLGTNAVDILVDFVNEMKQEYKNIKEHDKVHELDAVPMIEKHLHR KIGEEESHIYSGFVMLNSVFNGGKQVNSVPHKATAKYNVRTVPEYDSTFVKDLFEKVIRHVGEDYLTVDIPSSHDPVASD RDNPLIQNITRIAPNYVHEDIVVSALIGTTDASSFLGTNENNVDFAVFGPGESIMAHRVDEFIRKDMYLSYIDVYKDVFK AYLEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 1e-66 | 42 |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 5e-67 | 42 |
