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Name : SERP2334 (SERP2334) Accession : YP_189883.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 2371584 - 2372924 bp Length : 1341 bp Strand : - Note : identified by match to protein family HMM PF00083; match to protein family HMM TIGR00879 DNA sequence : ATGAAAGCAAATAAGTATTTAATCTTTATTTTGGGAGCACTTGGTGGCTTATTATATGGTTATGATAATGGTGTGATTTC CGGTGCTTTATTATTTATACATAAAGACATACCTCTCAATAGTACAACTGAGGGTATCGTTGTGTCTTCAATGTTAATTG GCGCAATAGTCGGTGCGGGAAGCAGTGGGCCACTTGCTGATAAATTAGGTCGTCGACGTCTAGTAATGCTCATCGCTATT GTATTTATTATTGGGGCACTGATTCTTGCTGCATCAACCAATTTAGCATTATTAATTATTGGACGTTTAATTATTGGTTT AGCAGTAGGTGGTTCGATGTCTACGGTACCTGTTTATTTAAGTGAAATGGCACCGACAGAATATCGTGGCTCACTAGGTT CACTTAATCAACTAATGATTACAATTGGTATTTTAGCAGCATATTTAGTCAACTATGCATTTGCGGATATTGAGGGTTGG CGTTGGATGCTAGGATTAGCAGTTGTTCCATCGGTTATTTTACTTGTGGGTATTTATTTTATGCCTGAGAGTCCAAGATG GTTACTTGAAAATAGAAACGAAGAAGCCGCTCGTCAAGTGATGAAGATTACTTATGACGATAGCGAAATTGATAAAGAAC TTAAAGAGATGAAAGAAATTAACGCTATCTCTGAATCTACATGGACAGTCATTAAATCACCATGGTTAGGTAGAATATTA ATTGTAGGTTGTATATTTGCTATTTTCCAACAATTTATTGGTATCAATGCAGTCATTTTCTATTCATCTTCAATCTTTGC TAAGGCTGGACTGGGTGAAGCGGCGTCTATATTAGGTTCAGTTGGTATAGGAACTATTAATGTTCTTGTAACAATAGTTG CCATTTTTGTAGTAGATAAGATTGATCGTAAAAAACTACTTGTTGGTGGTAATATTGGTATGATTGCCTCATTATTAATT ATGGCAATCTTAATTTGGACAATTGGAATTGCTTCATCAGCGTGGATTATTATTGTTTGTTTATCATTATTTATTGTATT CTTTGGGATTTCTTGGGGACCTGTTCTATGGGTTATGCTACCTGAATTATTCCCGATGCGCGCACGTGGCGCTGCTACGG GCATTTCAGCGCTTGTGCTAAATATCGGAACGCTTATCGTGTCATTGTTCTTCCCAATATTAAGTGATGCATTAAGTACA GAATGGGTATTTTTAATCTTTGCATTCATAGGTGTTTTAGCGATGATTTTCGTAATTAAATTCTTACCAGAAACACGCGG ACGTAGTTTAGAAGAAATAGAATATGAATTACGTGAACGTACAGGAGCAAGAACTGAATAA Protein sequence : MKANKYLIFILGALGGLLYGYDNGVISGALLFIHKDIPLNSTTEGIVVSSMLIGAIVGAGSSGPLADKLGRRRLVMLIAI VFIIGALILAASTNLALLIIGRLIIGLAVGGSMSTVPVYLSEMAPTEYRGSLGSLNQLMITIGILAAYLVNYAFADIEGW RWMLGLAVVPSVILLVGIYFMPESPRWLLENRNEEAARQVMKITYDDSEIDKELKEMKEINAISESTWTVIKSPWLGRIL IVGCIFAIFQQFIGINAVIFYSSSIFAKAGLGEAASILGSVGIGTINVLVTIVAIFVVDKIDRKKLLVGGNIGMIASLLI MAILIWTIGIASSAWIIIVCLSLFIVFFGISWGPVLWVMLPELFPMRARGAATGISALVLNIGTLIVSLFFPILSDALST EWVFLIFAFIGVLAMIFVIKFLPETRGRSLEEIEYELRERTGARTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0071 | YP_251986.1 | hypothetical protein | Not tested | SCCmec | Protein | 3e-123 | 67 |
