Gene Information

Name : SERP2221 (SERP2221)
Accession : YP_189776.1
Strain : Staphylococcus epidermidis RP62A
Genome accession: NC_002976
Putative virulence/resistance : Resistance
Product : cadmium resistance family protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4300
EC number : -
Position : 2257793 - 2258410 bp
Length : 618 bp
Strand : +
Note : identified by match to protein family HMM PF03596; match to protein family HMM TIGR00779

DNA sequence : 
ATGATTCAGACTATTGTAACTGCTGCTATTCTTTATATTGCGACAGCAGTAGATTTATTAGTGATTTTATTAATATTTTT
TGCTAGAGCAAAGACTAGAAAAGAATATAGAGATATTTATATTGGTCAATATGTAGGATCTGTGACATTGATTGTCGTAA
GTTTATTCTTTGCCTTTGTCTTAAATTATGTTCCTGAAAAATGGATATTAGGATTATTAGGGTTAATACCGATTTATTTA
GGAATTAAAGTAGCTATTTATGATGATTGTGAAGGAGAAAAGAGAGCTAAAAAAGAATTGAATGAAAAAGGATTGTCTAA
ATTAGTTGGTACGGTTGCAATTGTTACGATAGCAAGTTGTGGTGCTGATAATATTGGTTTATTTGTTCCGTATTTTGTGA
CATTAAGTGTTACTGATTTATTAATTACTTTGTTTGTCTTTTTAATTTTAATTTTCTTCTTGGTATTTACTGCACAAAAA
TTAGCTAATATTCCAGGAGTTGGAGAAATTGTTGAGAAATTTAGTCGTTGGATTATGGCTGTTATTTACATAGCTTTAGG
TTTATTCATTATTATTGAAAATGACACTATTGGAACAATTTTAGGATTTATATTTTAA

Protein sequence : 
MIQTIVTAAILYIATAVDLLVILLIFFARAKTRKEYRDIYIGQYVGSVTLIVVSLFFAFVLNYVPEKWILGLLGLIPIYL
GIKVAIYDDCEGEKRAKKELNEKGLSKLVGTVAIVTIASCGADNIGLFVPYFVTLSVTDLLITLFVFLILIFFLVFTAQK
LANIPGVGEIVEKFSRWIMAVIYIALGLFIIIENDTIGTILGFIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SERP2221 YP_189776.1 cadmium resistance family protein Not tested vSe1 Protein 9e-69 100
cadD YP_252014.1 cadmium binding protein CadD Not tested SCCmec Protein 3e-65 92
cadD YP_254238.1 cadmium binding protein CadD Not tested ¥ðSh1 Protein 8e-61 86

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SERP2221 YP_189776.1 cadmium resistance family protein BAC0057 Protein 1e-66 94