Gene Information

Name : SERP2216 (SERP2216)
Accession : YP_189772.1
Strain : Staphylococcus epidermidis RP62A
Genome accession: NC_002976
Putative virulence/resistance : Unknown
Product : ribokinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0524
EC number : -
Position : 2252735 - 2253673 bp
Length : 939 bp
Strand : -
Note : identified by match to protein family HMM PF00294

DNA sequence :
ATGAAAAATTCATCAAGAGAATATCACCAGATTAATAGCCAAAAAAAGGTTTTGGTGATCGGCAGTGCTGTTATTGATGT
GATTTTAAATGTTAATAGTATACCAAGTAGTGGATCAGACGAATTTGCCCACTCTGAGAAGACAATAGTAGGTGGTTGCG
CATATAATGTAGGCGATATACTTAGTCAGTTCAAAGCTAATTATGATTTGATGGTGCCCGTTGGCGATGGTCTTAATGGA
ACAATTATTGAAAATAAGTTAAAAAAAGAAGGCAAAACTTCATTATTAAATAATATATTAGGTGATAATGGTTGGACGTT
ATGTATCGTTGAAAATAATGGGGAACGCACTTTTTTAACGATACCTGGAGTTGAAATGACTTGGAAAAAGAATTGGTTTA
AAGAAATTGATCTTAATAAGTATGATTATATTTATGTGTCAGGTTATTCTTTTGAACCTCCTTCAGACGAAGTTTTATTA
GAAGAATTTAGTCGTTTAAACGAGAAAACTACAATTATTTTTGACCCCTCACCAAGGATTAATAAAATGAACTGTGAGAG
TATAAGGAAGTTGCTTGAAATAAACACAATAGTACATGCCAACGAAGGTGAAATATTACAATTGAGTAGTGAGAATCATG
TGAAAGATGCGGCATTAGAAGTAAGTAAACAGACTAATCAACCTGTGATAGTTACATTAGGCAACAAAGGTACTCTTATA
GCAAATAAGTGTAAAGTTAAGATTTTAGAGGGGGAAAAGGTTCCTGTAACTGATACTATAGGCGCTGGTGATTCACACAC
AGCAGCTTTTATAGCAGGTTTGCTAGATAACCAAAGTATTGAAAAAGCTTGTATATGGGGAAACGAAGTAGCATCTAAAA
TTGTGCAAGAACGAGGTGGAAATACGGATATATTCAATCCTATAGATAAAGAATATTAA

Protein sequence :
MKNSSREYHQINSQKKVLVIGSAVIDVILNVNSIPSSGSDEFAHSEKTIVGGCAYNVGDILSQFKANYDLMVPVGDGLNG
TIIENKLKKEGKTSLLNNILGDNGWTLCIVENNGERTFLTIPGVEMTWKKNWFKEIDLNKYDYIYVSGYSFEPPSDEVLL
EEFSRLNEKTTIIFDPSPRINKMNCESIRKLLEINTIVHANEGEILQLSSENHVKDAALEVSKQTNQPVIVTLGNKGTLI
ANKCKVKILEGEKVPVTDTIGAGDSHTAAFIAGLLDNQSIEKACIWGNEVASKIVQERGGNTDIFNPIDKEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SERP2216 YP_189772.1 ribokinase Not tested vSe1 Protein 4e-142 100