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Name : betB (SERP2177) Accession : YP_189733.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Virulence Product : betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.8 Position : 2208852 - 2210342 bp Length : 1491 bp Strand : - Note : identified by similarity to EGAD:97843; match to protein family HMM PF00171; match to protein family HMM TIGR01804 DNA sequence : ATGGAACTTGTAGATAAATTATCAAATCGTCAATATATTGATGGAGAATGGGTTGAAAGTTCAAATAAAAACACAAGAGA TATTATAAATCCTTACAATCAAGAAACAATCTTCACTGTAGCTGAAGGAACTAAAGAAGATGTTGAAAGAGCAATTTTAG CTGCTAGAAGATCTTTCGAAGACGGTGAATGGTCACTTGAAACAAGTGAAGTCAGAGGTAAAAAAGTGAGAGCCGTTGCT GATAAAATTAAAGAAAATAGAGAAGAGTTAGCTAAATTAGAAACATTAGACACTGGTAAAACTTTAGAAGAATCCTATGC TGATATGGATGATATTCATAATGTGTTTATGTATTTTGCTGGTTTAGCTGATAAAGATGGCGGTGAAATTATCAATTCAC CTATTCCTAATGCTGAAAGTAAAGTAGTTAAAGAACCTGTAGGTGTTGTTACTCAAATTACACCTTGGAACTATCCATTA CTTCAAGCATCTTGGAAAATTGCGCCAGCTTTAGCAACAGGTTGCTCATTAGTTATGAAACCAAGTGAAATTACTCCGTT AACAACAATTCGTGTATTTGAATTGATGGAGGAAGTTGGTTTCCCTAAAGGAACAATTAATTTAGTACTTGGTGCTGGAT CAGAAGTGGGCGACGTGATGTCAGGTCATGAAGAAGTCGATTTAGTTTCATTTACAGGTGGTATTGAAACAGGAAAACAC ATCATGAAACAAGCAGCTAATCACGTGACTGACGTTGCATTAGAATTAGGCGGCAAAAATCCTAATATTATTTTTGATGA CGCTGATTTTGAATTAGCTGTAGACCAAGCACTTAATGGTGGATATTTCCACGCTGGTCAAGTGTGCTCTGCTGGTTCAA GAATCTTAGTTCACAATGATATTAAAGATAAATTCGAAAAAGCTCTTATCGATCGTGTAAGCAAAATCAAATTAGGTAAC GGTTTTGATCAAGATACTGAAATGGGACCAGTTATCTCAACAGCACACCGCGATAAAATTGAAGGTTATATGGAAGTTGC GAAAAAAGATGGAGCAACAATTGCAATTGGTGGTAAACGCCCTGAACGTGAAGACTTACAAGCCGGATTATTCTTTGAAC CTACTGTAATTACAGATTGTGATACATCAATGCGTATTGTTCAAGAGGAAGTCTTTGGACCAGTTGTGACTGTAGAAGGA TTTGCTGACGAAGAAGAAGCTATTCGCTTAGCAAATGATTCAATTTACGGTTTAGCAGGTGCTATATTTACTAAAGATAT TGGTAAAGCACAACGTGTTGCAAATAAATTGAAACTTGGTACGGTTTGGATTAACGATTTCCATCCATACTTTGCACAAG CGCCATGGGGCGGTTACAAACAATCAGGTATCGGTAGAGAATTAGGTAAAGAAGGATTAGAGGAATATTTAGTAAGTAAA CACATTCTTACAAATACTAATCCAGAACCAGTGGATTGGTTCAGTAAATAA Protein sequence : MELVDKLSNRQYIDGEWVESSNKNTRDIINPYNQETIFTVAEGTKEDVERAILAARRSFEDGEWSLETSEVRGKKVRAVA DKIKENREELAKLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEIINSPIPNAESKVVKEPVGVVTQITPWNYPL LQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLVLGAGSEVGDVMSGHEEVDLVSFTGGIETGKH IMKQAANHVTDVALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVHNDIKDKFEKALIDRVSKIKLGN GFDQDTEMGPVISTAHRDKIEGYMEVAKKDGATIAIGGKRPEREDLQAGLFFEPTVITDCDTSMRIVQEEVFGPVVTVEG FADEEEAIRLANDSIYGLAGAIFTKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSK HILTNTNPEPVDWFSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 9e-79 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| betB | YP_189733.1 | betaine aldehyde dehydrogenase | VFG0082 | Protein | 4e-79 | 41 |
