Gene Information

Name : xylB (SERP2099)
Accession : YP_189655.1
Strain : Staphylococcus epidermidis RP62A
Genome accession: NC_002976
Putative virulence/resistance : Unknown
Product : D-xylulose kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1070
EC number : 2.7.1.-
Position : 2123184 - 2124674 bp
Length : 1491 bp
Strand : -
Note : identified by similarity to EGAD:108807; match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312

DNA sequence :
ATGGTGAAAGAAGTAGTTCTAGGAATTGATTTAGGCACAAGCGCAATAAAAATTATTGCTGTTGATCAACTAGGAAATGT
CATTGAATCAGTAAGCGAAACATTAAAGTTATACCAAGAGAATCCTGGTTATAGCGAACAAGACCCTAATGAATGGTTTG
AGGCTACTAAGAAAGGGATAAAAGAATTAATTCAATCAACAGAAATGTCAGATAAGATAGTAAAGGGGATTTCTTTTTCA
GGTCAAATGCATGGGTTGGTCATAGTTGATGATAATGGCATTCCTTTGAGAAAAGCGATTTTATGGAATGATACTAGAAA
TTCAATACAATGTAGACAAATTGAAGATATATATGGTGAAAGATTGAATTACAATCCGATATTAGAAGGATTTACACTTC
CTAAAATGTTATGGGTACAACAACATGAACCTGAAATTTGGAATCGAGTTGATGTTTTTATGTTGCCTAAAGATTATTTA
CGTTATTGCTTAACGCAGACAATTCATATGGAATATAGTGATGCATGTAGTACATTATTATTCAATCCTGAGAATTATGA
ATGGACAAGAGATGTTGGAGATACATTTAACATTGGTGATATCTATCCACCCTTAGTAAAATCACATTCGTATGTTGGAA
ATGTAACTTCATCACTGGCTAAAGAATTAGGATTATCTAGTGATGTTGCTGTATATGCTGGGGGTGGTGATAATGCATGT
GGTGCAATTGGTGCTGGTGTCATCCATGATAAAAGTGCATTATGTAGCATAGGTACTTCAGGTGTTGTATTAAATGTTGA
ATACCAACGTGTGACCTCATATGATAGTAATTTACACTTATTCAATCATAGTGTTCCAGATACTTATTACGCAATGGGAG
TAACGTTGGCAGCAGGCTATAGTTTAAACTGGTTAAAACAAACTTTTTTTGAAAATGAATCTTTTGAAGAGATTTTAAAT
TTAGCTGCATCTTCAAAGATGGGTGCCAATGGACTACTATTTACACCTTACTTAGCTGGAGAACGTACGCCACATGGTGA
TGCTCAAATACGTGGAAGTTTTATAGGTATCAGTGGGCAACATACTAAAGCTGACTTTGCGAGAGCAGTAATCGAAGGCA
TAACGTATTCTTTATATGATTCTATAAAGATTATGAGACGAGCTGGTCATGAAATGAACTCTATCACTTCAATCGGTGGT
GGTGCTAAGAGTAGATTTTGGTTACAACTTCAAGCTGATATTTTTAATGTGCAAATAAAAAGATTGAAGCATGAAGAAGG
CCCAAGCATGGGAGCGGCAATTTTAGCGGCATACGGTCTAGGATGGTTTAAAACAATTGAGTCTTGTGTAGAGGCATTTA
TTAAAGTAGACGAGGTGTTTGAGCCGAATAATGAAAATCATGACCTTTATGAACAATACTATTCAGTTTATGAAGCTATA
TATAAACAAACGAAACAGCTTACTGCTGATTTGTTAACGATAACGAATTAA

Protein sequence :
MVKEVVLGIDLGTSAIKIIAVDQLGNVIESVSETLKLYQENPGYSEQDPNEWFEATKKGIKELIQSTEMSDKIVKGISFS
GQMHGLVIVDDNGIPLRKAILWNDTRNSIQCRQIEDIYGERLNYNPILEGFTLPKMLWVQQHEPEIWNRVDVFMLPKDYL
RYCLTQTIHMEYSDACSTLLFNPENYEWTRDVGDTFNIGDIYPPLVKSHSYVGNVTSSLAKELGLSSDVAVYAGGGDNAC
GAIGAGVIHDKSALCSIGTSGVVLNVEYQRVTSYDSNLHLFNHSVPDTYYAMGVTLAAGYSLNWLKQTFFENESFEEILN
LAASSKMGANGLLFTPYLAGERTPHGDAQIRGSFIGISGQHTKADFARAVIEGITYSLYDSIKIMRRAGHEMNSITSIGG
GAKSRFWLQLQADIFNVQIKRLKHEEGPSMGAAILAAYGLGWFKTIESCVEAFIKVDEVFEPNNENHDLYEQYYSVYEAI
YKQTKQLTADLLTITN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0083 AAM75287.1 EF0083 Not tested Not named Protein 7e-106 47
xylB NP_814327.1 D-xylulose kinase Not tested Not named Protein 1e-105 47