Gene Information

Name : SERP0021 (SERP0021)
Accession : YP_187621.1
Strain : Staphylococcus epidermidis RP62A
Genome accession: NC_002976
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 17991 - 18749 bp
Length : 759 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGGCTATTTTAACAGCAAATCAATTATCAAAAGTATATGGTCACAAACAAAAATATCGAGCTTTAAATAATATAAGTTT
TTCAGTTGAAAAAGGGGAATTTGTAGCTGTCATGGGTCCTTCTGGATCAGGTAAAACGACTTTACTCAATGTGTTAAGTT
CAATAGATACTATTTCAGGAGGAACTGTAGAAGTTGAAGGTAAAGAAATTAATAAACTGAGCCACAAAGAAGTGGCAAAT
TTTCGAAAACAACATCTCGGTTTTATTTTTCAAGATTATAGCGTTTTACCCACATTAACAGTAAAAGAAAATATTATGCT
ACCACTCTCAGTACAAAAATTCCATAAATATGAAATGGAACAAAATTATAAAGAAGTGGCTGAGGCATTAGGTATTTATA
ACCTGGGAAATAAATATCCAAGTGAAATTTCTGGCGGTCAGCAACAACGTACGGCGGCAGCCCGGGCATTCGTCCATAAA
CCAACAATTATTTTCGCAGATGAACCTACTGGCGCATTAGATTCTAAAAGTGCTCAAGATTTGTTACACCGTCTAGAAGA
TATGAATAAACAATTTAATTCAACCATTATGATGGTGACACATGATCCTTCAGCCGCTAGTTACGCTGAGAGAGTCATTA
TGTTGAAAGACGGTGATATACACTCAGAAATCTACCAGGGTAACGATTCAAAACAAACATTTTACCAAGAAATTATGAAA
CTTCAAACCGCATTAGGTGGTGTCAGTCATGACATTTAA

Protein sequence : 
MAILTANQLSKVYGHKQKYRALNNISFSVEKGEFVAVMGPSGSGKTTLLNVLSSIDTISGGTVEVEGKEINKLSHKEVAN
FRKQHLGFIFQDYSVLPTLTVKENIMLPLSVQKFHKYEMEQNYKEVAEALGIYNLGNKYPSEISGGQQQRTAAARAFVHK
PTIIFADEPTGALDSKSAQDLLHRLEDMNKQFNSTIMMVTHDPSAASYAERVIMLKDGDIHSEIYQGNDSKQTFYQEIMK
LQTALGGVSHDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SERP0021 YP_187621.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-34 44
SERP0021 YP_187621.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-36 42