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Name : pdp (SERP1744) Accession : YP_189308.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 1783289 - 1784590 bp Length : 1302 bp Strand : - Note : Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway DNA sequence : ATGAGAATGATTGACATCATAGAAAAGAAACGAGACGGTAAGTCATTAACCAAAGAAGAAATAGAATTTTTTGTAAACGG ATACACTCATGGGGAGGTTCCAGATTACCAAGCTTCAAGTTTAGCTATGGCGATATTCTTTCAAGATATGAATGATGAAG AAAGAGCGGCATTGACAATGTCAATGGTTAACTCAGGAGAGAAAATCGACTTAAGCGATATCAATGGTATTAAGGTAGAC AAGCATTCTACAGGGGGCGTCGGTGATACAACGACACTCGTTCTTGCCCCATTAGTAGCGGCAGTAGGTGTTCCAGTTGC AAAGATGAGTGGTCGTGGTCTAGGACATACGGGGGGTACGATAGATAAATTAGAATCAGTTAAGGGATTTAACGTTGAAA TCAGTGAAAAAGATTTTATAAAACTTGTAAATGATAATCAAGTAGCAGTAATAGGACAATCAGGCAATCTGACCCCAGCT GATAAAAAATTATATGCACTACGGGATGTAACAGGGACAGTTAATTCTATTCCTCTAATCGCTTCGTCCATAATGAGTAA GAAAATTGCTGCTGGCGCAGATGCAATTGTTCTAGATGTCAAAACTGGCAGTGGTGCGTTTATGAAGACGCTAGATGATG CCGAAGCGCTTGCGCATGCGATGGTAAGAATTGGTAATAATGTAGGTCGTAATACGATGGCTATTATTTCAGATATGAGT CAACCTTTAGGAAATGCAATTGGTAATGCGCTCGAATTAAAAGAAGCTATCGCAACATTAAAAGGAAATGGGCCGAAAGA CCTAACAGAGCTTGTGTTAACACTTGGTTCTCAAATGGTTGTCTTAGCTGAACAAGCAACATCTTTAGATGAAGCGCGTC AGATGCTAATCGATGCTATAAAAACAGGCAAAGCTTTAAACAAATTCAAAACATTTCTATCGAATCAAGGAGGAGATGAC TCTATTGTGGATTCTCCTGAAAAGTTACCTAGCGCGAAATATCAAGTTGAATTTAAAGCTAAAAAAGATGGTTATATAAC TGAAATAATAGCTAATGAGATAGGCGTTGCTTCAATGATGTTAGGCGCTGGTCGTCAAACAAAAGAAGACGTTATTGATT TAGGTGTAGGTATCGTGTTAAATAAAAAAGTAGGAGAACATGTTGAGAAAGGTGAAAATATTTTAACTATTCATACCAAC ACCAAAGAGATCGATGATATTTTATATAAACTAGACAATAGTATTACTATTGAGAGTAAGGGCGAAGCTCCAACCTTAAT TCATAAAATAATAACCGAGTAG Protein sequence : MRMIDIIEKKRDGKSLTKEEIEFFVNGYTHGEVPDYQASSLAMAIFFQDMNDEERAALTMSMVNSGEKIDLSDINGIKVD KHSTGGVGDTTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTIDKLESVKGFNVEISEKDFIKLVNDNQVAVIGQSGNLTPA DKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGSGAFMKTLDDAEALAHAMVRIGNNVGRNTMAIISDMS QPLGNAIGNALELKEAIATLKGNGPKDLTELVLTLGSQMVVLAEQATSLDEARQMLIDAIKTGKALNKFKTFLSNQGGDD SIVDSPEKLPSAKYQVEFKAKKDGYITEIIANEIGVASMMLGAGRQTKEDVIDLGVGIVLNKKVGEHVEKGENILTIHTN TKEIDDILYKLDNSITIESKGEAPTLIHKIITE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 8e-75 | 45 |
