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Name : SERP0158 (SERP0158) Accession : YP_187754.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : pyridoxal biosynthesis lyase PdxS Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0214 EC number : - Position : 162243 - 163130 bp Length : 888 bp Strand : + Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate DNA sequence : ATGTCTAAAATAGTAGGATCAGATCGAGTTAAAAGAGGAATGGCTGAAATGCAAAAAGGCGGTGTCATTATGGACGTCGT TAATGCAGAACAAGCTAAAATTGCTGAAGAAGCCGGAGCTGTTGCCGTAATGGCATTAGAGCGTGTACCATCAGATATTC GTGCTGCTGGCGGTGTTGCACGTATGGCGAATCCTAAAATAGTTGAAGAAGTTATGAATGCCGTATCAATTCCGGTTATG GCTAAAGCCAGAATTGGTCATATTACAGAAGCTAGAGTTTTAGAATCGATGGGTGTTGACTATATAGATGAGTCTGAAGT ATTAACGCCTGCAGACGAAGAATATCATTTAAGAAAAGATCAATTTACAGTTCCTTTTGTGTGTGGCTGTCGTAACTTAG GTGAAGCAGCACGACGCATTGGTGAAGGTGCGGCGATGTTGCGTACGAAAGGTGAACCTGGTACTGGTAATATTGTTGAA GCTGTCCGTCATATGAGACGTGTTAATTCTGAAGTTAGCCGCTTAACAGTTATGAATGATGATGAAATTATGACATTTGC AAAAGATTTGGGTGCACCTTATGAAGTATTAAAACAAATTAAAGATAATGGACGTCTTCCTGTAGTTAATTTTGCAGCTG GTGGTGTTGCTACGCCTCAGGATGCAGCACTAATGATGGAATTAGGTGCAGATGGTGTATTTGTTGGTTCAGGTATATTT AAATCTGAAGATCCTGAAAAATTTGCTAAAGCTATCGTTCAAGCTACAACACATTATCAAGATTATGAGTTAATCGGAAA ATTGGCTAGTGAGCTAGGTACGGCTATGAAAGGTCTAGATATTAATCAAATTTCACTAGAAGAAAGAATGCAAGAGCGTG GTTGGTAA Protein sequence : MSKIVGSDRVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVM AKARIGHITEARVLESMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVE AVRHMRRVNSEVSRLTVMNDDEIMTFAKDLGAPYEVLKQIKDNGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIF KSEDPEKFAKAIVQATTHYQDYELIGKLASELGTAMKGLDINQISLEERMQERGW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pdxS | YP_005137204.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 5e-80 | 61 |
| pdxS | YP_005141805.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 8e-80 | 60 |
| DIP0227 | NP_938620.1 | pyridoxal biosynthesis lyase PdxS | Not tested | Not named | Protein | 7e-80 | 60 |
