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Name : SERP1676 (SERP1676) Accession : YP_189241.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : S1 RNA-binding domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1720367 - 1722517 bp Length : 2151 bp Strand : - Note : identified by similarity to EGAD:101821; match to protein family HMM PF00575 DNA sequence : ATGGATAACAGTTTAATTGAAACAATTGTAAGTAAATATCAATTTTCGGAAAAACAAATTAAAGCAGTTTTAAAATTGCT GAAAGAAAACAATACGGTTCCATTTATAGCAAGATATCGTAAAGAAGCTACAGGTGGACTTGATGAAGTAGAAATTAAAC AAATCAATGATGAATATAACTATATGTTAAATCTTCAAAAACGTAAAGAAGAAGTAATACATAATATTGATCAACAGGGT CTATTAACTTCTGATTTAAAGCAAGACATATTAACACAGACGAAGCTACAAAGAGTTGAAGATTTATATCGTCCATATAA ACAAAAAAAGAAAACACGTGCAACTGAGGCTAAAAGAAAAGGATTAGAAGATTTAGCAGATTGGTTTTCACAATCAAAAT TGGATACAAAAATTGAAGATAAAGCTCAATTATTCTTAAATGATGAAGTGACTACAATTGAAGATGCGATAGAAGGGGCT AAAGATATTATAGCTGAACGTATTTCGGATAATCCTCAATATCGCTCTAAAATACTTAAAGATGTTTTTAATCAGGGACT AATTGTTTCCTCGAAAAAGAAAAAAGCCGAAGATGAGAAACAAACATTTTCTATGTACTATGATTACAAGGAACCAATTA AACGTATTGCTAATCATCGTGTTTTAGCGATGAATCGAGGAGAAAAAGAAAAAGTATTATCAATAAAAATTGATTTTGAC ACGACACGTATTCAAAGAGAAATAGCAAATGTTGAGATAAAAACTCAAAATGAAGCAACTCCGTTTATTAAAGAGGCTAT TCAGGATAGCCTTAAGCGATTAATTCTTCCTTCAATAGAAAGAGAAATTAGAGGAGATTTAACACAAAATGCAGAATCTC ATGCAATAGATGTATTCAGTGAAAATCTTAGAAATTTATTACTACAACCACCAATGAAAGGTAAACAAATTCTTGGAGTA GATCCAGCATTTAGAACAGGGTGCAAACTTGCTGTCGTCAATCCATTTGGTACCTTTATTGCTAAAGGTGTTATTTATCC TCATCCTCCAATATCAAAAGTTGAGGCAGCCGAAAAAGAGCTGGTAAAGATGATAAGTGACTATAATATTGAGCTTTTAG CGATTGGTAACGGTACTGCGAGTAGAGAAACTGAACAATTTGTTGCTCAAGTAATAAAAAAATATCAACTTCAAGCTCAA TTTATCATAGTCAATGAAGCTGGCGCATCAGTTTATTCAGCATCAGAAATTGCTAGACAAGAATTTCCAGATTTTCAAGT AGAAGAACGAAGTGCAGTTTCAATTGGTAGAAGAGTTCAGGATCCTTTAAGCGAACTTGTTAAAATAGATCCTAAATCTA TAGGAGTAGGACAGTACCAACATGATGTCAACCAAAAAGATTTAAGTAGTGCCTTAACGTTTGTAGTAGAGACTGCCGTC AATCAAGTTGGTGTGGATGTGAATACTGCTTCTAAATCCTTGTTACAATATGTATCAGGTCTTACATCAACTATCGCTCA AAATATTATTGATTATAAGGAAGAAAACGGACCTATAAAACATCATAAAGAAATAAGTAGAATTAAACGATTAGGTGCAA AAACATTTGAGCAAAGTATTGGTTTTTTAAGAATTGTTGATGGTGAAGAACCTTTAGATAATACTGCAATACACCCTGAA AGTTACGATGTTGCATATCGCATGCTTCATCAATTAGATTTAACTGCACAAGATATAGGTTCCGTTAAACTCAAAAACAC GTTATCAAATGTTAATATTTCAACACTTGTATCTCAATTAAATATTGGTGAACCTACATTAAAAGATATAATACAATCAT TGATTGCACCTAATAGAGATCCAAGAGATGAATTTGAAACACCTATTTTGAAGTCCGATGTATTATCGATTGAAGATTTA TCTAAAGGCATGAAGTTGAATGGTACAGTAAGAAATGTTGTTGACTTTGGAGCATTTGTAGATATCGGTGTTAAACAAGA CGGACTAGTACACATATCAAAATTATCTAAGAAATTCGTTAAAAATCCAATGGATATGATAAGTGTAGGAGATATTGTAG AAGTTTGGATTTTAGATATAGATGAAAATAAAGGCAAAGTTTCATTGACTATGGTTGCCCCAAATGAATAA Protein sequence : MDNSLIETIVSKYQFSEKQIKAVLKLLKENNTVPFIARYRKEATGGLDEVEIKQINDEYNYMLNLQKRKEEVIHNIDQQG LLTSDLKQDILTQTKLQRVEDLYRPYKQKKKTRATEAKRKGLEDLADWFSQSKLDTKIEDKAQLFLNDEVTTIEDAIEGA KDIIAERISDNPQYRSKILKDVFNQGLIVSSKKKKAEDEKQTFSMYYDYKEPIKRIANHRVLAMNRGEKEKVLSIKIDFD TTRIQREIANVEIKTQNEATPFIKEAIQDSLKRLILPSIEREIRGDLTQNAESHAIDVFSENLRNLLLQPPMKGKQILGV DPAFRTGCKLAVVNPFGTFIAKGVIYPHPPISKVEAAEKELVKMISDYNIELLAIGNGTASRETEQFVAQVIKKYQLQAQ FIIVNEAGASVYSASEIARQEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSIGVGQYQHDVNQKDLSSALTFVVETAV NQVGVDVNTASKSLLQYVSGLTSTIAQNIIDYKEENGPIKHHKEISRIKRLGAKTFEQSIGFLRIVDGEEPLDNTAIHPE SYDVAYRMLHQLDLTAQDIGSVKLKNTLSNVNISTLVSQLNIGEPTLKDIIQSLIAPNRDPRDEFETPILKSDVLSIEDL SKGMKLNGTVRNVVDFGAFVDIGVKQDGLVHISKLSKKFVKNPMDMISVGDIVEVWILDIDENKGKVSLTMVAPNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-131 | 43 |
