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Name : SERP1513 (SERP1513) Accession : YP_189078.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : truncated ribonucleoside-diphosphate reductase 2, alpha subunit Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0209 EC number : - Position : 1575579 - 1578488 bp Length : 2910 bp Strand : - Note : contains a 384 residue intein; identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR01443; match to protein family HMM TIGR01445; may be nonfunctional due to interuption DNA sequence : TTGAGTAAATGGATCGAAAAAAACAATGAAATCATGAGAAGAGATGAGTTAGGACAGCTTAGCTTATCAAAAGACAAAGA AGCAATTAAGTTATATTTAGAACACATTAAGAGTAAAACAAAGCAATTCTCAAATCAGATTGCAAGATTACGTTACTTAG TAGAAGAAGATTACTATATTGATGTATTTAAAGATTACAGTGAAGAAACATTATTAGAGCTTTTAGATTATGCTTATTCA TTCGGCTTTGAGTTCCAAAGCTTCATGGCAGCAAGCAAATTCTATGATACATACGCATTAAAAACTAGAGATAAGTCGCA ATGGCTTGAAGACTTTGAACAACATAACGTAATCGTTTCTCTGTACTTAGCTGGTGGAGATGTTGATTTAGCTAAAAGAT ACATTAAAGCACATACACTTCAAACAGTACAAACAGCAACTCCAACATATTTAAATGCTGGTCGTAAGCAACGAGGAGAA TTAGCTTCTTGTTATTTATTCACAATGGATGACACATTAAACTCTATCAACTTCATTAGAAGTCAAGTATCACAAGCTAG TAAGATTGCTGGTGGTGTAGCAGTTAACTTAACACGATTAAGAGGTCGTGGTGCTACATTAAAAGGTGTTAAGAATGTAG GTAAAGGTATCGTACCAGTTGCTAAATTAATTGAAGGTGAAGTTAGTTATGCTGATCAATTAGGTCAACGTGCTGGAGCT GGTGCTGCTTACTTAAACATTTTCCACTCAGATGTAATTGAGTTATTAAACACTAAGAAAGTTAATGCAGATGAAGATAC ACGTTTAGCTACACTTTCAATCGGTTTAATTGTTCCTTCATTATTCTTTGATTTAGCAAAAGAAGACAAAGACTTATATA TGTTTGAACCATACTCAATTCAAGAAGAATTCGGTAAAGATGTAATCTTAGATGACATTAATATTAATGATTGGTATGAC AAGTTCGTTGAGAATGAAAATGTTATCAAACATAAAATTAATGCTAGAGAAATGTTAAATCTGATCGCTCAAATTCAATT ACAATCTGGTTATCCTTATATCATGTATAAAGATAACGCAAACAAAAACCATGCTTTAAATGAGCTTGGTGAAATCAAAA TGTCTAACTTATGTGTTACTGGAGACACTGAGTTATTAACTGAAAAAGGTTATGTGAAAGCCAAAGACTTGTATGAAAGT CAAGAAGATTTGAAAGTAGTAATTGATAATAGAACTAAGAATTATGATATTAACAATAAAGGTACTGATATCGTAAATGC TATTCCAATGCAACTTACAGCTAAACAAGCTGAAATTTATGAAATTACTACTAAACAAGGGTTTAAAATTAAATCTACCG AATGGCACAAATATTATAGAAAAATAAACGACTCAATTGAAAAAGTTCAGTTAAATCAATTAGAGGTAGGAGATAAGCTA TTAGTTCAATCTGGTAATGGAAGTTATGGAGATTTTCATGATCCAAAATTAGCATTCTTGATGGGGCTTATCGCTGGAGA TGGGACATTTGGAAGAGACGGTTCAGTTAAAATTTATCTATATCACGAGAAGCAATATCTTAAAGAAACTATTGAAGAAT TAGTAGCTTATATTATAGATAAATATAGAAATAAAAATGAGTTTTTACATCATAGTGCAAACTTACATCCTAAATTTGTT GAAAATAAAGAACTACAAAAATTAACAATTAGCAGTGTTGAGCTATACAAAATATTATCTAGATTTGGATTTAACAGAGA GACTAAATTGAGATTTCCAAACTTATTAAAAAATGCTACAAAAAATACAATAACTGCTTATTTATCTGGCTTATATCAAA TGGATGCTTGCGTAAATACAAATGAAAAATATAAAGCAATGAGCATCGAATTGACAACAATCAGTGAAGAATTAGCAAGA GATATTCAAATGCAACTGTTAAATCTCGGTGTGTATTCATCAATATATCAAAGTGAGAGAGAGATAAGCTTATTACCAGA TGGTAATGGCGGCATGAAAGAGTACAAAGTTCAAAATACATATAAAATTAGCATTCAAGACAGAAGCTCAAGAGATTTGT TTATGAAAGAAGTAGCTTTGAAACCTAAAGATATACATAAAGCAATGATTTTTAACTTAACATTGCGACCAAATAGTAGA AAACCGAAACATGATTTTACTGCCGAAATTACTGAAATTAAATATATTGGTAAAGAAGATGTTTATGATACCACACAAGA AGATTATCACTCATTAATCTTCAATGGAATTGTGACAGGAAATTGTACTGAGATCTTCCAATACATGCATGTTTCAGATA TCAAAGATTACTACGAACCAGATGAATTAGGTCAAGATATTATCTGTAACTTAGCTTCTCTTAATATGGTTAAATCAATC GAAGAGAAAGAAATTGAAGAGTCAATTCGTACTGGAATGAGAGCTTTAACGTTTGTAGCTAACAATTCACGTATCGAACA CTTACCAACAGTTCATAAAGCAAATAAAAACAATAGAGCAGTTGGTTTAGGTGTAATGTCATTCCATAGTATGTGTGCTA AAAACAAAATTAGATATGGTTCAGAAGAGTCACTTGATTTGCTAAATGTTTACTGCATGATGATGGACTATTATTCATTA GACGAGTCAATGAAGATTGCAGTTGAAAGAAATGACAAATTCTATGGCTTTGATCAAACAGATTATAAAGCTAAAGATGG AAAAGAGTTTGGAGAATACTTCTATAAAAACAATCGTGTAACTAAGAATGTAGAACCAATTACTCCGAAAGTTAAAGAGA TTTTTAAAGGTATTTACATTCCTACTAAAGAAGACTGGCAACGGTTAGCTAGAGAAGTTGATAAGAATGGTTTATATAAC TCATATAGATTGTCAATCGCACCTTATTGA Protein sequence : MSKWIEKNNEIMRRDELGQLSLSKDKEAIKLYLEHIKSKTKQFSNQIARLRYLVEEDYYIDVFKDYSEETLLELLDYAYS FGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVIVSLYLAGGDVDLAKRYIKAHTLQTVQTATPTYLNAGRKQRGE LASCYLFTMDDTLNSINFIRSQVSQASKIAGGVAVNLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYADQLGQRAGA GAAYLNIFHSDVIELLNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDLYMFEPYSIQEEFGKDVILDDININDWYD KFVENENVIKHKINAREMLNLIAQIQLQSGYPYIMYKDNANKNHALNELGEIKMSNLCVTGDTELLTEKGYVKAKDLYES QEDLKVVIDNRTKNYDINNKGTDIVNAIPMQLTAKQAEIYEITTKQGFKIKSTEWHKYYRKINDSIEKVQLNQLEVGDKL LVQSGNGSYGDFHDPKLAFLMGLIAGDGTFGRDGSVKIYLYHEKQYLKETIEELVAYIIDKYRNKNEFLHHSANLHPKFV ENKELQKLTISSVELYKILSRFGFNRETKLRFPNLLKNATKNTITAYLSGLYQMDACVNTNEKYKAMSIELTTISEELAR DIQMQLLNLGVYSSIYQSEREISLLPDGNGGMKEYKVQNTYKISIQDRSSRDLFMKEVALKPKDIHKAMIFNLTLRPNSR KPKHDFTAEITEIKYIGKEDVYDTTQEDYHSLIFNGIVTGNCTEIFQYMHVSDIKDYYEPDELGQDIICNLASLNMVKSI EEKEIEESIRTGMRALTFVANNSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYGSEESLDLLNVYCMMMDYYSL DESMKIAVERNDKFYGFDQTDYKAKDGKEFGEYFYKNNRVTKNVEPITPKVKEIFKGIYIPTKEDWQRLAREVDKNGLYN SYRLSIAPY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SERP1513 | YP_189078.1 | truncated ribonucleoside-diphosphate reductase 2, alpha subunit | Not tested | ¥ÕSP¥â | Protein | 0.0 | 100 |
