Gene Information

Name : SERP1464 (SERP1464)
Accession : YP_189032.1
Strain : Staphylococcus epidermidis RP62A
Genome accession: NC_002976
Putative virulence/resistance : Unknown
Product : Tn554-related, transposase C
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1529916 - 1530281 bp
Length : 366 bp
Strand : -
Note : identified by similarity to EGAD:6135

DNA sequence :
ATGGAAAAATTTAATAGACAAGAACAATTAAAACAGTTGCATGCAGAACGAAAAGTTAAAACCGAGAAAAAAGTTGATAA
AGCAATAAATGATTTAGTTCAAAAAAATAAAGAAATTAACTTTAACATCGTTTCTAAACATTCAAAAGTTTCGAAAGCTA
CATTATATAAAAATAATAAAATTCGAAAGAAAATAGAGAAGTTACGTGAACAAAACAGAGAAATATTTGTTCATAAAAAT
AAAAATGACGGTAAAGATGCGTTAATCTCCTCTTTAAAAAGAAAAGTAAATTCTTTAGAAAAAGAGAAAAAAATGTTGAA
AGAAGAAATTAGCGTTTTATATTCTAGGCTGTATGAGGATATTTAA

Protein sequence :
MEKFNRQEQLKQLHAERKVKTEKKVDKAINDLVQKNKEINFNIVSKHSKVSKATLYKNNKIRKKIEKLREQNREIFVHKN
KNDGKDALISSLKRKVNSLEKEKKMLKEEISVLYSRLYEDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpC NP_373290.1 transposase for Tn554 Not tested Type-II SCCmec Protein 6e-10 45
tnpC-3 YP_190050.1 transposase C Not tested Type-II SCCmec Protein 6e-10 45
tnpC BAB47665.1 transposase C(Tn554) Not tested Type-III SCCmec Protein 4e-10 45
tnpC BAC53827.1 transposase C(Tn554) Not tested SRImec-III and SCCmec-III region Protein 4e-10 45
tnpC BAC57472.1 transposase C Not tested Type-IIIinv SCCmec Protein 4e-10 45
tnpC BAA82203.1 transposaseC Not tested Type-II SCCmec Protein 4e-10 45
unnamed BAB47607.1 transposase C of Transposon Tn554 Not tested Type-III SCCmec Protein 1e-10 45
tnpC1 YP_039524.1 transposase C 1 Not tested Type-II SCCmec Protein 6e-10 45
tnpC BAC57489.1 transposaseC Not tested Type-IIIinv SCCmec Protein 1e-10 45
tnpC NP_370578.1 transposase C Not tested Type-II SCCmec Protein 6e-10 45