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Name : spc-2 (SERP1344) Accession : YP_188916.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Resistance Product : Tn554, streptomycin 3''-adenylyltransferase Function : - COG functional category : R : General function prediction only COG ID : COG1708 EC number : 2.7.7.47 Position : 1400546 - 1401328 bp Length : 783 bp Strand : - Note : identified by similarity to EGAD:9921; match to protein family HMM PF01909 DNA sequence : ATGAGCAATTTGATTAACGGAAAAATACCAAATCAAGCGATTCAAACATTAAAAATCGTAAAAGATTTATTTGGAAGTTC AATAGTTGGAGTATATCTATTTGGTTCAGCAGTAAATGGTGGTTTACGCATTAACAGCGATGTAGATGTTCTAGTCGTCG TGAATCATAGTTTACCTCAATTAACTCGAAAAAAACTAACAGAAAGACTAATGACTATATCAGGAAAGATTGGAAATACG GATTCTGTTAGACCACTTGAAGTTACGGTTATAAATAGGAGTGAAGTTGTCCCTTGGCAATATCCTCCAAAAAGAGAATT TATATACGGTGAGTGGCTCAGGGGTGAATTTGAGAATGGACAAATTCAGGAACCAAGCTATGATCCTGATTTGGCTATTG TTTTAGCACAAGCAAGAAAGAATAGTATTTCTCTATTTGGTCCTGATTCTTCAAGTATACTTGTCTCCGTACCTTTGACA GATATTCGAAGAGCAATTAAGGATTCTTTGCCAGAACTAATTGAGGGGATAAAAGGTGATGAGCGTAATGTAATTTTAAC CCTAGCTCGAATGTGGCAAACAGTGACTACTGGTGAAATTACCTCGAAAGATGTCGCTGCAGAATGGGCTATACCTCTTT TACCTAAAGAGCATGTAACTTTACTGGATATAGCTAGAAAAGGCTATCGGGGAGAGTGTGATGATAAGTGGGAAGGACTA TATTCAAAGGTGAAAGCACTCGTTAAGTATATGAAAAATTCTATAGAAACTTCTCTCAATTAG Protein sequence : MSNLINGKIPNQAIQTLKIVKDLFGSSIVGVYLFGSAVNGGLRINSDVDVLVVVNHSLPQLTRKKLTERLMTISGKIGNT DSVRPLEVTVINRSEVVPWQYPPKREFIYGEWLRGEFENGQIQEPSYDPDLAIVLAQARKNSISLFGPDSSSILVSVPLT DIRRAIKDSLPELIEGIKGDERNVILTLARMWQTVTTGEITSKDVAAEWAIPLLPKEHVTLLDIARKGYRGECDDKWEGL YSKVKALVKYMKNSIETSLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spc | BAA82204.1 | O-nucleotydiltransferase(9) | Not tested | Type-II SCCmec | Protein | 9e-119 | 100 |
| spc1 | YP_039523.1 | streptomycin 3''-adenylyltransferase 1 | Not tested | Type-II SCCmec | Protein | 1e-118 | 100 |
| ant(9) | NP_370577.1 | O-nucleotidylltransferase | Not tested | Type-II SCCmec | Protein | 1e-118 | 100 |
| ant(9) | NP_373289.1 | O-nucleotidylltransferase(9) | Not tested | Type-II SCCmec | Protein | 1e-118 | 100 |
| spC | YP_190051.1 | streptomycin 3''-adenylyltransferase | Not tested | Type-II SCCmec | Protein | 1e-118 | 100 |
| ant(9) | BAC57473.1 | O-nucleotidyltransferase(9) | Not tested | Type-IIIinv SCCmec | Protein | 9e-119 | 100 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spc-2 | YP_188916.1 | Tn554, streptomycin 3''-adenylyltransferase | NC_009782.5559439.p0 | Protein | 6e-119 | 100 |
| spc-2 | YP_188916.1 | Tn554, streptomycin 3''-adenylyltransferase | NC_002758.1121631.p0 | Protein | 6e-119 | 100 |
| spc-2 | YP_188916.1 | Tn554, streptomycin 3''-adenylyltransferase | NC_002952.2859154.p0 | Protein | 6e-119 | 100 |
| spc-2 | YP_188916.1 | Tn554, streptomycin 3''-adenylyltransferase | NC_002745.1123578.p0 | Protein | 6e-119 | 100 |
| spc-2 | YP_188916.1 | Tn554, streptomycin 3''-adenylyltransferase | NC_002745.1124853.p0 | Protein | 6e-119 | 100 |
| spc-2 | YP_188916.1 | Tn554, streptomycin 3''-adenylyltransferase | NC_009782.5559472.p0 | Protein | 6e-119 | 100 |
| spc-2 | YP_188916.1 | Tn554, streptomycin 3''-adenylyltransferase | NC_002758.1120013.p0 | Protein | 6e-119 | 100 |
| spc-2 | YP_188916.1 | Tn554, streptomycin 3''-adenylyltransferase | NC_002952.2859153.p0 | Protein | 6e-119 | 100 |
| spc-2 | YP_188916.1 | Tn554, streptomycin 3''-adenylyltransferase | NC_002745.1122823.p0 | Protein | 6e-119 | 100 |
| spc-2 | YP_188916.1 | Tn554, streptomycin 3''-adenylyltransferase | NC_002745.1124325.p0 | Protein | 6e-119 | 100 |
| spc-2 | YP_188916.1 | Tn554, streptomycin 3''-adenylyltransferase | NC_002745.1125314.p0 | Protein | 6e-119 | 100 |
| spc-2 | YP_188916.1 | Tn554, streptomycin 3''-adenylyltransferase | GU235985.1.orf1.gene | Protein | 6e-119 | 100 |
