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Name : polA (SERP1254) Accession : YP_188827.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 1290547 - 1293177 bp Length : 2631 bp Strand : - Note : identified by similarity to EGAD:108026; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 DNA sequence : TTGAATAAATTAGTATTAATAGATGGTAATAGTCTAAGCTTTAGAGCGTTTTATGCTCTCCCTTTACTTTCAAACCATGC AGGTATTCATACAAATGCAGTTTACGGCTTTGCTATGCTCTTAGAAAAAATAATTAAAGAAGAAAAACCGAATCATTTTT TAGTTGCATTTGATGCAGGTAAAACGACTTTCAGACATTCTAAGTACAGTGAATATAAAGGTGGTCGTCAAAAGACTCCA CCTGAATTAAGTGAGCAATTTCCATATATTCGTCAACTTTTAGATGCGTATCATATTAAAAGATATGAACTTGATAATTA TGAAGCTGATGACATTATAGGAACATTAAGTAGACAAGCTGATGAAGAAGATTTTGAAACCATTATCATTACAGGTGATA GAGACTTAACTCAATTAGCCACTGATAATGTTACAATATATTATACAAAAAAAGGTGTTACCGACGTTGATCATTATACA CCTAAATTTATAGCAGAGAAATATAATGGTTTAGTGCCGAAACAAATTATCGATATGAAAGGTCTAATGGGGGATACCTC TGACAATATTCCTGGCGTTGCTGGTGTCGGCGAAAAGACGGCTATTAAATTACTTAATCAATTTGAGTCAGTAGAAGGGG TCTATGAACATATTGAGGAGGTCACTGCAAAAAAATTAAAAGAAAAACTCATCAATAGTAAAGATGATGCCTTAATGAGT AAAGATTTAGCAACAATCAATGTTCACAGTCCGATTGAAGTATCATTAGAAGATACAAAATTAACTCTACAAGACGACAC TACAGAAAAAATTGAACTATTTAAAAAGCTAGAATTTAAACAACTATTAGCAGATATAGACACATCCTCTACGAATGAAG AAGTCATAGATAAAACTTTTGAAATTGAGCAAGACTTTCAAAATGTAGATTTGAATGATTTAAACGAAGCGGTAATACAT TTTGAACTCGAAGGCACTAATTATCTTAAAGACACTATTCTCAAGTTTGGTTTTTATACAAATCATCAACATGTAGTGAT AAATGCTGAGGATGTAAAGGATTATAAACATTTAGTTCAATGGCTTGAAGATAAAAATACAACTAAAATTGTCTATGATG CAAAAAAAACTTATGTATCTGCTCATCGATTAGGGATTAATATAGAAAATATTGAATTTGATGTTATGTTAGCAAGCTAT ATTATTGACCCATCACGTTCTATTGATGACGTTAAATCTGTGGTAAGTTTATATGGACAAAATTATGTAAAAGATAATAT TACAATATTTGGGAAAGGTAAGAAACATCATATACCTGAAGAACCAATTCTAAACGAACACATTGCCTCTGTGACAGAAG CTATAGCAGCTGTAACTCCAACCATGAAATCACAGTTAGAAGATTATAATCAAATTGAACTGTTGAAAGATTTAGAATTA CCATTAGCAAGAATTTTAAGTGAAATGGAAGAAATTGGTATATATACCGATATCAATGATTTGAAAGAAATGGAATTCGA AATTCAAAAAAAATTGGATGTATTAATATCCAATATTCATGAGTCGGCTGGTGAAGCGTTTAATATCAATTCTCCTAAGC AATTAGGTGTTGTTTTATTTGAAACATTACAATTGCCTGTCATTAAGAAGACCAAAACGGGCTATTCAACAGCTGTAGAC GTATTAGAAAAACTACAAGGTGAGCATCCTATTATAGATGATATTTTAGAATATAGACAACTTGCTAAGTTGCAATCTAC GTATGTAGAGGGATTACAAAAAGTAATAAGCAAAGATCATAGAATTCACACACGTTTTAATCAAACGCTTGCTCAAACTG GTAGATTATCAAGTATAGATCCTAATTTACAAAATATACCTATACGATTAGAAGAAGGAAGAAAGATTAGAAAGGCCTTT AAACCAACTTCTAAAGATAGTGTGATTTTATCTGCTGATTATTCACAAATTGAGTTACGTGTACTTGCTCATATTACGCA AGATGAAAGTTTAAAACATGCATTTATAAACGGACATGATATTCACACTGCAACAGCAATGAAAGTATTTAATGTTGAAT CTGACCAGGTTGATAGTTTAATGAGACGTCAAGCAAAAGCTGTTAACTTTGGTATTGTATATGGTATCAGCGATTATGGA TTGAGTCAGAGCTTGGGTATTACTAGAAAACAAGCAAAAGCATTTATTGATGATTATTTAGCTAGTTTTCCAGGTGTAAA ACAATATATGTCAGACATTGTTAAAGATGCAAAAGCACAAGGTTATGTGGAAACACTACTTCATCGTCGTCGATACATTC CTGATATAACAAGTAGAAACGTTAATTTAAGAAGTTTTGCAGAAAGAACAGCAATGAATACACCCATACAAGGTAGTGCA GCTGACATAATAAAATTAGCAATGGTTAAATTCAGTGAAAAGATTAAAGAAACTAAATATCATGCTAAGTTATTATTACA AGTTCATGATGAACTCATATTTGAAATACCAAAATCAGAAGTAGAAGATTTTAGTAAATTTGTAGAAGAAATTATGGAAC AAGCATTAGTGCTCGATGTACCTTTAAAAGTAGATTCGAATTATGGTGCAACATGGTACGATGCTAAATAA Protein sequence : MNKLVLIDGNSLSFRAFYALPLLSNHAGIHTNAVYGFAMLLEKIIKEEKPNHFLVAFDAGKTTFRHSKYSEYKGGRQKTP PELSEQFPYIRQLLDAYHIKRYELDNYEADDIIGTLSRQADEEDFETIIITGDRDLTQLATDNVTIYYTKKGVTDVDHYT PKFIAEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQFESVEGVYEHIEEVTAKKLKEKLINSKDDALMS KDLATINVHSPIEVSLEDTKLTLQDDTTEKIELFKKLEFKQLLADIDTSSTNEEVIDKTFEIEQDFQNVDLNDLNEAVIH FELEGTNYLKDTILKFGFYTNHQHVVINAEDVKDYKHLVQWLEDKNTTKIVYDAKKTYVSAHRLGINIENIEFDVMLASY IIDPSRSIDDVKSVVSLYGQNYVKDNITIFGKGKKHHIPEEPILNEHIASVTEAIAAVTPTMKSQLEDYNQIELLKDLEL PLARILSEMEEIGIYTDINDLKEMEFEIQKKLDVLISNIHESAGEAFNINSPKQLGVVLFETLQLPVIKKTKTGYSTAVD VLEKLQGEHPIIDDILEYRQLAKLQSTYVEGLQKVISKDHRIHTRFNQTLAQTGRLSSIDPNLQNIPIRLEEGRKIRKAF KPTSKDSVILSADYSQIELRVLAHITQDESLKHAFINGHDIHTATAMKVFNVESDQVDSLMRRQAKAVNFGIVYGISDYG LSQSLGITRKQAKAFIDDYLASFPGVKQYMSDIVKDAKAQGYVETLLHRRRYIPDITSRNVNLRSFAERTAMNTPIQGSA ADIIKLAMVKFSEKIKETKYHAKLLLQVHDELIFEIPKSEVEDFSKFVEEIMEQALVLDVPLKVDSNYGATWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 48 |
