|
Name : tnpA-1 (SERP1224) Accession : YP_188798.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : Tn554, transposase A Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1257314 - 1258399 bp Length : 1086 bp Strand : - Note : identified by similarity to EGAD:7942; match to protein family HMM PF00589; match to protein family HMM PF02899 DNA sequence : GTGAAGGTTCAAAGGATAGAAGTGGAGAATAAGCCGTATCCATTGTATTTATTACTAGATAAAGAATACCAGCTAATAGA ACCAGTAATGAAATTTATTAAATACTTAGATAATACTGGTAAGTCTCCTAATACCATTAAGGCATACTGCTATCATTTAA AGTTGCTGTACGAGTTCATGGAACAGAGAGGTGTTATTCTTAATGATATTAACTTTGAGTTGTTAGCAGACTTCGTAGGT TGGTTGAGATATCCTTCAGCATCAAATGTAATTGATCTTCAGTCAAAAAAAGCCATAAGAGAAGAAACGACAGTGAATAC AATTTTAAATGTAGTTATGAGTTTTCTTGATTATTTAAGTAGATTAGGAGAATTTAAATCAATTGATGTATTTAAACAAG CAAAGGGAAGAAATTTCAAAGGATTTTTACATCATGTTAATAAGGGTAGATACCAAAAGAATGTCTTAAAGTTAAGGGTT AAAAAGAAACAGATAAGAACATTGAGATCAAAGGAAGTTAAGCAAATTATTGATGCTTGTCATACGAAAAGAGATAAATT AATTTTAATGCTTATGTATGAGGGTGGTTTAAGAATCGGTGAAGTGTTATCGCTTAGGCTTGAAGATATTGTCACTTGGG ACAATCAAATCCATTTAACACCTAGAGATGTTAATGTTAATGAAGCTTATATTAAATTAAGGAAGGAAAGAACAATACAT GTGAGTAAAGAACTTATGTCACTTTATACAGATTACTTGATATATGAGTATAGTGAGGAATTGGAGCATGATTATGTTTT TATTTCCTTAAAAGAAGGCTATTTTGGGAAACCACTAAAGTACCAAAGTGTTCTTGATCTAGTTAGAAGAATAGTTAAAA GGACTGGAATAGAATTTACATCACATATGCTTCGCCACACTCACGCAACGCAGCTAATTAGGGAAGGATGGGATGTTGCG TTCGTTCAAAAGAGATTAGGTCACGCACATGTTCAGACAACGTTAAATACCTATGTTCATCTTTCAGATCAGGATATGAA AAATGAGTTTAATAAATACCTCGAGAGAAAGGAGCATAAGAAATGA Protein sequence : MKVQRIEVENKPYPLYLLLDKEYQLIEPVMKFIKYLDNTGKSPNTIKAYCYHLKLLYEFMEQRGVILNDINFELLADFVG WLRYPSASNVIDLQSKKAIREETTVNTILNVVMSFLDYLSRLGEFKSIDVFKQAKGRNFKGFLHHVNKGRYQKNVLKLRV KKKQIRTLRSKEVKQIIDACHTKRDKLILMLMYEGGLRIGEVLSLRLEDIVTWDNQIHLTPRDVNVNEAYIKLRKERTIH VSKELMSLYTDYLIYEYSEELEHDYVFISLKEGYFGKPLKYQSVLDLVRRIVKRTGIEFTSHMLRHTHATQLIREGWDVA FVQKRLGHAHVQTTLNTYVHLSDQDMKNEFNKYLERKEHKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | BAB47667.1 | transposase A(Tn554) | Not tested | Type-III SCCmec | Protein | 2e-170 | 100 |
| tnpA | BAC53829.1 | transposase A(Tn554) | Not tested | SRImec-III and SCCmec-III region | Protein | 2e-170 | 100 |
| tnpA | BAC57491.1 | transposaseA | Not tested | Type-IIIinv SCCmec | Protein | 2e-170 | 100 |
| unnamed | BAA82201.1 | transposaseA | Not tested | Type-II SCCmec | Protein | 2e-170 | 100 |
| tnpA1 | YP_039526.1 | transposase A 1 | Not tested | Type-II SCCmec | Protein | 2e-170 | 100 |
| tnpA | NP_370580.1 | transposase A | Not tested | Type-II SCCmec | Protein | 2e-170 | 100 |
| tnpA | NP_373292.1 | transposase A for Tn554 | Not tested | Type-II SCCmec | Protein | 2e-170 | 100 |
| tnpA-3 | YP_190048.1 | transposase A | Not tested | Type-II SCCmec | Protein | 2e-170 | 100 |
