|
Name : tnpC-1 (SERP1222) Accession : YP_188796.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : Tn554, transposase C Function : - COG functional category : - COG ID : - EC number : - Position : 1255041 - 1255418 bp Length : 378 bp Strand : - Note : identified by similarity to EGAD:6135 DNA sequence : ATGGATAAACAAGTTAGAAATACAACAGAAATTGTACGTTTGGCGAAGCAGAAATCAAAAAAGACAAGGGAAAAAGTAGA CAAAGCGATTTCTAAATTTTCGATTGAAGGTAAAGTTATTAATTTTAATTCAATAGCAAAGGAAGCTAATGTTTCTAAAT CATGGCTTTATAAGGAACACGATATTAGGCAAAGAATCGAATCCCTTCGTGAGCGTCAAATAACAGCAAATGTAGTCTCA AAACCCAAGAAAAGTTCTCGTTCGGAGGAAATCCTTATTAAAACCTTAAAAAGAAGAGTAATGGAATTAGAAAAAGAAAA TAAAAAATTACAGAACCAAATTCAAAAATTATATGGAGATCTGTATAATAAAGAATAA Protein sequence : MDKQVRNTTEIVRLAKQKSKKTREKVDKAISKFSIEGKVINFNSIAKEANVSKSWLYKEHDIRQRIESLRERQITANVVS KPKKSSRSEEILIKTLKRRVMELEKENKKLQNQIQKLYGDLYNKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpC-3 | YP_190050.1 | transposase C | Not tested | Type-II SCCmec | Protein | 2e-51 | 100 |
| tnpC | BAB47665.1 | transposase C(Tn554) | Not tested | Type-III SCCmec | Protein | 2e-51 | 100 |
| tnpC | BAC53827.1 | transposase C(Tn554) | Not tested | SRImec-III and SCCmec-III region | Protein | 2e-51 | 100 |
| tnpC | BAC57472.1 | transposase C | Not tested | Type-IIIinv SCCmec | Protein | 2e-51 | 100 |
| tnpC1 | YP_039524.1 | transposase C 1 | Not tested | Type-II SCCmec | Protein | 2e-51 | 100 |
| tnpC | BAA82203.1 | transposaseC | Not tested | Type-II SCCmec | Protein | 2e-51 | 100 |
| tnpC | NP_370578.1 | transposase C | Not tested | Type-II SCCmec | Protein | 2e-51 | 100 |
| tnpC | NP_373290.1 | transposase for Tn554 | Not tested | Type-II SCCmec | Protein | 2e-51 | 100 |
| unnamed | BAB47607.1 | transposase C of Transposon Tn554 | Not tested | Type-III SCCmec | Protein | 1e-50 | 97 |
| tnpC | BAC57489.1 | transposaseC | Not tested | Type-IIIinv SCCmec | Protein | 1e-50 | 97 |
