Name : SERP1122 (SERP1122) Accession : YP_188698.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1121 EC number : - Position : 1160580 - 1161362 bp Length : 783 bp Strand : - Note : identified by match to protein family HMM PF00005 DNA sequence : ATGACAACACCAGTTTTTGAATTACGAAATTTAGATTATTATTTCGATAATAAGCATGTATTAGAGAACATAAATATCAA AATTAATCAGGGAGAATTTTTAGCAATTGTTGGTCCGAACGGGGCAGGCAAATCTACTTTACTAAAAGTTATACTAGGGC TATTGCCTATACAAAAGGGCGAGATAATTGTTGATGGAAAACCATTTAAAGGTAATAAATCTTCATTGAAAATTAGCTAT GTTTCTCAAAAAGCTTCTGCCTTCAATGCAGGTTTCCCAGCTAGTGTAAAGGAAGTTGTTTTAAGTGGTCTGACTAAAAC AAAAAAATTATTTCAAAGATTTAATAAAAATGACTATCAAAAAGTCACAAAGGTATTAGAGAGATTAAATATATCTCATT TAATAAATAAAAATATAGCTGAACTATCTGGTGGTCAACAACAACGTGTACTTATTGCTAGAGCACTTATTTCAGACCCA AGTGTGCTAGTGTTAGATGAACCTACAAACGGAATTGATGCAAAACATGTAAGCAAATTTTACGATACACTTGATAAATT AAAAAAACAGGGGATTACAATAATTTTAGTCACTCACGATATTGGCGTTGTAGCAGATACCGCTACTGAAGTAGCATGTT TAAATAAACATCTTCATTTCCACGGTTCCACAGAAGCATTTAAGTCTTTAGATGAAGTTGAAATTTCAAAAATTTATGGT CATCCTATTCAATTTGTTGATCATCAACACAACCGAACATGTTGTAATGAGGGAAATGAATAA Protein sequence : MTTPVFELRNLDYYFDNKHVLENINIKINQGEFLAIVGPNGAGKSTLLKVILGLLPIQKGEIIVDGKPFKGNKSSLKISY VSQKASAFNAGFPASVKEVVLSGLTKTKKLFQRFNKNDYQKVTKVLERLNISHLINKNIAELSGGQQQRVLIARALISDP SVLVLDEPTNGIDAKHVSKFYDTLDKLKKQGITIILVTHDIGVVADTATEVACLNKHLHFHGSTEAFKSLDEVEISKIYG HPIQFVDHQHNRTCCNEGNE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
EF0575 | NP_814340.1 | cationic ABC transporter ATP-binding protein | Not tested | Not named | Protein | 1e-31 | 41 |
ef0093 | AAM75296.1 | EF0093 | Not tested | Not named | Protein | 1e-31 | 41 |