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Name : malA (SERP1070) Accession : YP_188647.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : alpha-glucosidase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.20 Position : 1114441 - 1116096 bp Length : 1656 bp Strand : - Note : identified by match to protein family HMM PF00128 DNA sequence : ATGAAAAGAAATTGGTGGAAAGAAGCAGTTGCATATCAAGTATATCCACGAAGTTTTAATGATAGTAATGGAGATGGAAT AGGTGATCTACCTGGATTAATTGAAAAATTAGATTATCTAGAAAATTTAGGAATAGATGTCATTTGGTTAAGCCCAATGT ATCCATCACCAAACGATGATAATGGATATGATATTAGTGACTACAAAGGCATTATGAGTGAATTTGGTACAATGAACGAT TTTGATCAATTGTTATCAAGCATACATCAAAGAGGGATGAAATTAATATTAGACTTAGTGGTTAATCACACATCAGATGA ACACCCTTGGTTTATTGAATCAAAATCTAGTAAAACAAATGCAAAAAGAGATTGGTATATTTGGGCAGATCCTAAACCGG ATGGATCTGAACCTAATAACTGGGAAAGTATCTTTAATGGTTCAACTTGGGAGTTTGACGAATCGACTAAGCAATACTAT TTCCATTTATTTAGCAAAAAGCAGCCAGATTTAAATTGGGAAAATCCAGATGTAAGACAAGCTGTGTTTGAAATGATGAA TTGGTGGTTTGAAAAAGGTATTGACGGATTTAGAGTTGATGCCATTACTCATATTAAAAAGAATTTTGAAGCAGGAGATT TACCTGTACCTGATGGCAAAAAATTTGCTCCAGCATTTGATGTAGATATGAATCAGCCAGGAATACAAGAATGGCTCCAA GAAATGAAAGATAAATCGTTAAGTCGGTATGACATTATGACTGTAGGCGAGGCTAATGGTGTTACTCCTAATGATGCTGA AGAATGGGTAGGAGAAGAAAATGGGAAATTTAATATGATATTCCAGTTTGAACATCTTGGTTTATGGAGTACTGGCGATA CGAAATTCGATGTTAAATCCTATAAACAAGTCTTAAATCGTTGGCAAAAGCAACTAGAAAATGTAGGTTGGAATGCTTTA TTTATCGAAAACCATGATCAACCACGTCGTGTTTCAACCTGGGGTGATGATAAAAATTATTGGTATGAATCAGCAACTAG TCACGCTACTGCCTACTTTTTACAACAGGGCACACCTTTTATTTACCAAGGTCAAGAAATAGGTATGACTAATTATCCAT TTGAAAGCATTGAAAGTTTCAACGATGTCGCAGTGAAAACTGAATATCAAATAGTCAAAAAAGAAGGTGGAGATGTCAAT CAATTACTAGATAAATATAAAATGGAAAACCGAGACAATGCAAGGACTCCAATGCAATGGAATAATTCTATCAATGCTGG ATTCACTACTGGTAAGCCATGGTTTCATGTAAACCCTAACTATACAGAAATTAATGTTAAACAACAACTAAATGATAAGT TTTCGATACTTTCTTATTATAAAGCGTTAATTCAACTAAAAAAATCTGATTTGATTTACACCTACGGTAAGTTTAATATG GTCGATGCTGAAAATAAGCAGGTTTTTGCATATACACGCACATTTAAAAACAATACTGTATTAATTGTAGCCAATCTCAC AAATGAAGTATCAGAACTAAACCTACCTTTTGAATTAGATATTTCATCTGTAGATATAAAATTGCATAATTATCACTTAA ATGATATAAATTTAGACCATATTAAACCTTATGAATCATTCGTCGTTGAAATATAA Protein sequence : MKRNWWKEAVAYQVYPRSFNDSNGDGIGDLPGLIEKLDYLENLGIDVIWLSPMYPSPNDDNGYDISDYKGIMSEFGTMND FDQLLSSIHQRGMKLILDLVVNHTSDEHPWFIESKSSKTNAKRDWYIWADPKPDGSEPNNWESIFNGSTWEFDESTKQYY FHLFSKKQPDLNWENPDVRQAVFEMMNWWFEKGIDGFRVDAITHIKKNFEAGDLPVPDGKKFAPAFDVDMNQPGIQEWLQ EMKDKSLSRYDIMTVGEANGVTPNDAEEWVGEENGKFNMIFQFEHLGLWSTGDTKFDVKSYKQVLNRWQKQLENVGWNAL FIENHDQPRRVSTWGDDKNYWYESATSHATAYFLQQGTPFIYQGQEIGMTNYPFESIESFNDVAVKTEYQIVKKEGGDVN QLLDKYKMENRDNARTPMQWNNSINAGFTTGKPWFHVNPNYTEINVKQQLNDKFSILSYYKALIQLKKSDLIYTYGKFNM VDAENKQVFAYTRTFKNNTVLIVANLTNEVSELNLPFELDISSVDIKLHNYHLNDINLDHIKPYESFVVEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 5e-121 | 49 |
