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Name : SERP1004 (SERP1004) Accession : YP_188581.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : - Position : 1018790 - 1019452 bp Length : 663 bp Strand : - Note : identified by match to protein family HMM PF00005 DNA sequence : ATGTTAGAGTTCAAACAAGTGAGCAAATCTTTCAGAGATGGCAATCAAATGATTCAGGCAGTAAAACCTACCGATTTAAA AATAATTCAGGGGGAACTGATTGCTATCGTGGGACCCTCAGGTTCAGGGAAAAGTACATTTTTAACTATGGCTGGCGCCT TACAAAGACCTACGTCAGGAAATATTTACATCAATAACAAAAATATATCAATATTATCTGAAAAACAGTTATCTCAAATA AGAATTAACGAAATAGGTTTTATATTACAATCGACGAATCTCGTGCCTTTTTTAACAATCGAACAACAATTCAAACTTCT TGGTAAATATAAAAAAGATACATTAAGTGAAGATGAATACCAAAAGTTGGTTAAACAGCTAAATTTATCGGATATTACCA ATCAATTACCAAATCAAATATCTGGCGGTCAAAAACAGCGCGTGGCAATAGCTAAAGCTATTTACACAAATCCATCAATC ATACTAGCAGATGAACCTACCGCTTCACTAGATACGAATAATGCAATGGCTGTAATGAAAATACTTCAAAAACAAACGAA AGAAAGAAATAAAACATGTGTGATTGTTACTCATGATGAACGTTTAACTCATTTTTGTGATAAAACATATTTCATGGAGG ATGGAGTTCTTTCACTCCAATAG Protein sequence : MLEFKQVSKSFRDGNQMIQAVKPTDLKIIQGELIAIVGPSGSGKSTFLTMAGALQRPTSGNIYINNKNISILSEKQLSQI RINEIGFILQSTNLVPFLTIEQQFKLLGKYKKDTLSEDEYQKLVKQLNLSDITNQLPNQISGGQKQRVAIAKAIYTNPSI ILADEPTASLDTNNAMAVMKILQKQTKERNKTCVIVTHDERLTHFCDKTYFMEDGVLSLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SARLGA251_00480 | YP_005754062.1 | ABC-type transport system ATPase | Not tested | Type-XI SCCmec | Protein | 2e-67 | 72 |
| unnamed | AAP55232.1 | unknown | Not tested | SaPIbov2 | Protein | 4e-75 | 71 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SERP1004 | YP_188581.1 | ABC transporter ATP-binding protein | CP001581.1.gene798.p | Protein | 5e-37 | 42 |
