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Name : LMOf2365_0945 (LMOf2365_0945) Accession : YP_013547.1 Strain : Listeria monocytogenes F2365 Genome accession: NC_002973 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 961441 - 962163 bp Length : 723 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : ATGTCAGAAATAGCGATTAAAGTTTCTAATTTAGATGTGAAAATTGGAAAGAAACAAATCTTAACCAATATGACTCTCGA AATAGAAAAGGGCGAGATATTTGGCTTAATAGGGCCATCCGGTGCAGGAAAAACAACACTCGTGAAAACCATCATCGGAA TGGAAAAGGCAACGAATGGCACAACTGAGGTTTTAGGAAAAGCAATGCCAAATTTACCAGTCATTAGCAAAATTGGTTAC ATGGCCCAATCAGACGCACTTTATACGGATTTAACAGCCAAAGAAAACTTGGATTTTTTCGCTTCACTATATTCCATCAA AGGTGCAGCCAAAAAAGACCGAATGAATTATGCAGCTACTTTAGTTAATTTACAACAAGATTTAACTAAAAAGGTGAACA ATTATTCAGGAGGGATGAAACGCAGGCTGTCTCTGGCCATTTCTGTCCTTGCTGACCCAGATGTCCTAATTTTAGATGAG CCAACAGTCGGTATTGATCCAGAACTAAGAAAAACGATTTGGGCAGAGCTAGGCGATCTAAAAGCGAACGGTAAATGTAT CCTTGTGACGACACACGTGATGGATGAAGCCGAAAAATGTGATAGACTTGCCATGATCAGAAATGGGCAAATAATCGCTG TAGGGACCCCACAAGAGCTCTCAAGTAAAACGTCATCTGGTAAGCTAGAAGATGCCTTTTTAGAGTTTGGAGGGAAGCAC TAA Protein sequence : MSEIAIKVSNLDVKIGKKQILTNMTLEIEKGEIFGLIGPSGAGKTTLVKTIIGMEKATNGTTEVLGKAMPNLPVISKIGY MAQSDALYTDLTAKENLDFFASLYSIKGAAKKDRMNYAATLVNLQQDLTKKVNNYSGGMKRRLSLAISVLADPDVLILDE PTVGIDPELRKTIWAELGDLKANGKCILVTTHVMDEAEKCDRLAMIRNGQIIAVGTPQELSSKTSSGKLEDAFLEFGGKH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH2613 | YP_254528.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 2e-58 | 52 |
| SH0081 | YP_251996.1 | hypothetical protein | Not tested | SCCmec | Protein | 3e-45 | 51 |
| SE0094 | NP_763649.1 | ABC transporter ecsA-like protein | Not tested | SCCpbp4 | Protein | 3e-55 | 51 |
