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Name : LMOf2365_0917 (LMOf2365_0917) Accession : YP_013519.1 Strain : Listeria monocytogenes F2365 Genome accession: NC_002973 Putative virulence/resistance : Unknown Product : S1 RNA-binding domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 933883 - 936060 bp Length : 2178 bp Strand : + Note : identified by match to protein family HMM PF00575 DNA sequence : ATGGAACAAATGCAAGATAAAATAATAAAACTAGTCCAAAAATCGCTAACGTATAAACCAGCGCAAATCAATGCCGTTAT CAAATTAATGGAAGAAGGCAACACAGTTCCATTTATCGCGCGGTACCGTAAAGAAATGACTGGTAGCTTAGATGAAGTAG AAATCCGTGATATCGAAGAAACCTTTGAATATGTAACAAAATTAGAAAATCGTAAAGAAGAAATTATTCGCCTAATAGAT GAACAAGGAAAATTAACAGACGAACTGAGAGCGGCAATTACCAAAGCGGAAAAACATCAAGCGCTCGAAGATTTATACCG TCCTTACAAACAAAAGAAACGCACAAAAGCAACGATTGCGAAAGAAAAAGGATTAGAGCCGCTTGCTGATTGGCTAATGA GCTTCCTAAGTAACGCGGACCCACTGAAAGAAGCGGCAAACTATATTTCAGAAGAAAAAGAAGTGGAGTCAGCAGAAGCT GCTTTACTCGGCGCACATGAAATCATCGCGGAACAAATCAGTGATGAGCCTAGTTTCCGTGAGTGGATTCGTAACTTTAC GCGCAAATTTGGGATGATTGAATCCAGAGCGAAAAACGCCGAAGCAGACGAAAAAGGCGTTTACGAAATGTATTATGAAT TTAACGAAATGATTGGCAAAGTAGCAAGTCACCGCATCCTTGCATTTAACCGCGGAGAGAAAGAAGACATTTTACGTGTA CAAGTCCAAGTAGATACGACAAAAATTTTCCAATATTTATTTGAAAAAGTTATCCAAAACCGTAATTCTGCAACACGACC ATACGTAGAAGAAGCTATAATGGATGCTTATAAACGCTTTATCGGACCGGCAATTGAACGTGAAATTCGCGGTGAACTAA CAGAAAAAGGCGAAGAACAAGCCATCCATATTTTCTCCGAGAACTTGCGCAAACTACTTTTACAACCACCTTTAAAAGGA AAAATCATTCTTGGGGTCGATCCGGCTTTTAGAACAGGTTGTAAATTCTCTGTATTAGATCAAACGGGGAAAGTACTAGA AATTGGCGTTGTTTATCCACATACAGCAAAAGCACGCCGTCCGGAAGCCAAACAAAAAATTGCGGAGATTTTATCCACAT ACAAAGTGGAAGTTATCGCAATTGGTAACGGAACAGCCTCACGTGAAACAGAGCAATTTATTGTGGAAGTGATTCGTGAA TCGAAATCGAACGCTTATTATTGTATCGTCAATGAAGCTGGTGCGAGTGTTTATTCAGCGAGTGAAACTGCCCGCGAAGA ATTCCCAGACTATCAAGTAGAAGAGCGTAGCGCTGTTTCGATTGGTCGTCGTTTGCAAGATCCGCTAGCTGAACTTGTGA AAATCGATCCAAAATCTGTAGGCGTAGGGCAGTATCAACATGACGTAGCGCAAAAACGTTTAAATGAAACACTAACTTTC GTCGTTGAAACGGCCGTTAACCAAGTGGGCGTAAACGTTAATACGGCCTCGGCTTCTCTGTTACAATATGTTGCTGGCTT AAACAAGACAGTCGCAAATAATATCCGTAAATATCGCGAAGAAAACGGCTCGTTCGCTTCTCGCAAAGAGTTGAAAAAAG TACCTCGTCTTGGAGCAAAATCGTATGAACAAAGTATCGGTTTCTTACGTATTTTGGAAGGTGAAAATCCACTTGATAAA ACCGCCATTCACCCGGAAAGTTATAAGGCAGCTGAACAAATTGTAAAAGCAGCTGGTTTCGGATTGAAAGATATTGGTAG CGAGGATTTAAAAGCCGCACTTCAAGCGCTTAGTATCCCAGAAGAAGCAGAGAAATTAAGCATCGGTAAAGAAACCATGC GCGATATCATTGATAATTTAATTGCTCCTGGTCGCGACCTTCGTGACGAACTTCCAGCACCACTTTTAAAACAAGATGTT ATTTCGATGGAAGATTTAAAACAAGGCATGGAATTACAAGGAACCGTTCGGAACGTAGTTGACTTTGGCGCATTTGTTGA TATTGGCGTGAAACAAGACGGCCTTGTGCATATTTCGAAACTAAGCAATTCTTTTGTTAAAAACCCGATGGATGTCGTTT CAGTAGGAGACGTTGTAACTGTTTGGGTAGATGAAGTAGATACAAAGAAAAACCGTATTGCTTTAACTATGCTTAATCCT AATGGAAGTGTTAAATAA Protein sequence : MEQMQDKIIKLVQKSLTYKPAQINAVIKLMEEGNTVPFIARYRKEMTGSLDEVEIRDIEETFEYVTKLENRKEEIIRLID EQGKLTDELRAAITKAEKHQALEDLYRPYKQKKRTKATIAKEKGLEPLADWLMSFLSNADPLKEAANYISEEKEVESAEA ALLGAHEIIAEQISDEPSFREWIRNFTRKFGMIESRAKNAEADEKGVYEMYYEFNEMIGKVASHRILAFNRGEKEDILRV QVQVDTTKIFQYLFEKVIQNRNSATRPYVEEAIMDAYKRFIGPAIEREIRGELTEKGEEQAIHIFSENLRKLLLQPPLKG KIILGVDPAFRTGCKFSVLDQTGKVLEIGVVYPHTAKARRPEAKQKIAEILSTYKVEVIAIGNGTASRETEQFIVEVIRE SKSNAYYCIVNEAGASVYSASETAREEFPDYQVEERSAVSIGRRLQDPLAELVKIDPKSVGVGQYQHDVAQKRLNETLTF VVETAVNQVGVNVNTASASLLQYVAGLNKTVANNIRKYREENGSFASRKELKKVPRLGAKSYEQSIGFLRILEGENPLDK TAIHPESYKAAEQIVKAAGFGLKDIGSEDLKAALQALSIPEEAEKLSIGKETMRDIIDNLIAPGRDLRDELPAPLLKQDV ISMEDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTMLNP NGSVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 6e-123 | 45 |
