Gene Information

Name : LMOf2365_2552 (LMOf2365_2552)
Accession : YP_015140.1
Strain : Listeria monocytogenes F2365
Genome accession: NC_002973
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2609153 - 2609821 bp
Length : 669 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGACTTTAATGATGAAAAATATTTCTAAAAATTATCAGGATGGCGAGCAAGTCATCGAAGTATTGAAAAATGTATCTTT
AGAAGTGGCGCAAGGAGAATTCGTTGCAATCGTTGGACCTTCAGGCGCCGGGAAAAGTACATTTTTATCTATCGCAGGCG
CCTTATTATCCCCAACAGAAGGAGAAATTGCTATAGGTGGAAAAGTGTTAAATGACCTTACAAGCAAAGAATTAACAAAA
GTGCGGCTCGATAAAGTAGGATTCATTTTCCAAGGTGCGAACCTAATCCCGTACTTAAATGTCCGTGATCAGTTACTCGT
AATTGCGGAACTATCTGGTGAAAAAGGGCGGGGTGCGAAAGAAAAAGCAGATGAATTACTTAAAGAATTAGGTTTAACTG
CTCGCGAAAACAATTACCCGGAAAGTTTATCGGGTGGTGAAAAACAACGTGTCGCTATTGCTAGAGCACTGATGAACGAC
CCCGATATTATTTTAGCGGACGAACCAACCGCAAGCTTAGATGCGAACCGTGGTCACAAAGTAGTCCAAATGATTGCGGA
TGAAGTAAAACGAAAAAATAAAGCTGCCATCATGGTTACGCATGATGAACGAGTTTTAGACTTAGTTGACCGCGTAATTC
GGATTGAAGATGGCTATTTGAAGGATTAA

Protein sequence : 
MTLMMKNISKNYQDGEQVIEVLKNVSLEVAQGEFVAIVGPSGAGKSTFLSIAGALLSPTEGEIAIGGKVLNDLTSKELTK
VRLDKVGFIFQGANLIPYLNVRDQLLVIAELSGEKGRGAKEKADELLKELGLTARENNYPESLSGGEKQRVAIARALMND
PDIILADEPTASLDANRGHKVVQMIADEVKRKNKAAIMVTHDERVLDLVDRVIRIEDGYLKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 3e-42 46
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-48 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOf2365_2552 YP_015140.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-40 46
LMOf2365_2552 YP_015140.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-37 43
LMOf2365_2552 YP_015140.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-35 41
LMOf2365_2552 YP_015140.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-33 41