Gene Information

Name : LMOf2365_1877 (LMOf2365_1877)
Accession : YP_014470.1
Strain : Listeria monocytogenes F2365
Genome accession: NC_002973
Putative virulence/resistance : Resistance
Product : manganese ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1904974 - 1905696 bp
Length : 723 bp
Strand : -
Note : identified by similarity to SP:Q55281; match to protein family HMM PF00005

DNA sequence :
ATGGAAATTCAAGGTTTAACAATAGCGTATAAACAAAAGGTGGCAATTGATAATGTCACACTTCAAATAGCATCAGGAAA
ACTAACGGGTATTGTCGGTCCAAATGGAGCAGGTAAATCAACCTTATTAAAAGGAATGATGGGACTAATTCCGCGTGAAC
AAGGGCAGGTCACATTGGCTGACAAACCACTTACATATTGGAGAAAGAAAATCGCATACGTACCGCAACGGAGTGAAGTA
GATTTAACTTTCCCAATTACCGTTTTTGATATGGTGTTGCTCGGAACGTATCCAGCGCTCGGATTAATTAAGCGTCCTGG
AAAAAAAGAGAAACAACTCGCATTAGATGCGTTAGAACAAGTAGAAATGACAGGCTTTATGAAAAGACAAATAGGAGAGC
TATCTGGCGGCCAACTGCAACGTGTTTTTATCGCACGAGCACTTGCCCAACATGCGGAAATTTTCTTTTTAGATGAGCCA
TTTGCAGGTATTGATATGACGAGTGAAGCGCTGATTATGCGCCTGTTAAAAAAGCTAAGAGATAATGGGAAAACGATTGT
CGTGGTCCATCATGATTTTCATAAAGTGGCTGCTTACTTCGACGATATCATTTTACTTAATAAGAAGTTAGTCGCGCACG
GTCCAGTGGAGCAAACATTTACAGAAGAGAAAATTCAATTTGCTTACGGTGACGCACCGGTGGCATTTGCGACGGGGGTG
TAA

Protein sequence :
MEIQGLTIAYKQKVAIDNVTLQIASGKLTGIVGPNGAGKSTLLKGMMGLIPREQGQVTLADKPLTYWRKKIAYVPQRSEV
DLTFPITVFDMVLLGTYPALGLIKRPGKKEKQLALDALEQVEMTGFMKRQIGELSGGQLQRVFIARALAQHAEIFFLDEP
FAGIDMTSEALIMRLLKKLRDNGKTIVVVHHDFHKVAAYFDDIILLNKKLVAHGPVEQTFTEEKIQFAYGDAPVAFATGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-54 51
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-54 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOf2365_1877 YP_014470.1 manganese ABC transporter ATP-binding protein BAC0400 Protein 6e-61 54
LMOf2365_1877 YP_014470.1 manganese ABC transporter ATP-binding protein BAC0440 Protein 2e-45 41