Gene Information

Name : LMOf2365_1875 (LMOf2365_1875)
Accession : YP_014468.1
Strain : Listeria monocytogenes F2365
Genome accession: NC_002973
Putative virulence/resistance : Virulence
Product : manganese ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1903199 - 1904131 bp
Length : 933 bp
Strand : -
Note : identified by similarity to SP:P31304; match to protein family HMM PF01297

DNA sequence :
ATGAAAAAAATAATAGTTGTAGCTCTTTTCGCATTAGTAGTTGTGCTTGCGGGGTGTTCCAGTCAAAATAGCGATTCGAA
AAAAACAGACGGCAAATTAAATGTCGTAGCCACCTATTCGATATTAGCAGATATTGTAAAAAATGTAGGCGGGGATAAAA
TTGAACTGCATAGTATTGTGCCTGTTGGCGTTGATCCACATGAATATGATCCCTTGCCAGCCAACATTCAAAGTGCTGCG
GATGCTGATTTAATCTTTTACAATGGATTGAATTTGGAAACAGGGAATGGTTGGTTTGATCGTATGTTAGAAACGGCGGA
TAAATCAAGAGACGACAAGGAGCAAGTGGTGGAGTTAAGTAAAGGTGTAAAACCCAAATACTTAACGGAAAAAGGCAAGA
CGTCTGAAACAGATCCACATGCATGGCTTGATCTTCATAACGGAATTATCTATACTGAAAATGTTCGTGATGCACTTGTA
AAAGCGGATCCAGACAATGCGGATTTTTATAAAGAGAATGCGAAAAAATATATCAACAAATTAGCTACTCTGGATAAAGA
AGCAAAACAAAAATTTGCAGATTTGCCAGAAAATCAAAAAACATTAGTAACTAGCGAAGGTGCCTTTAAATATTTTGCAG
CTCGCTACGGATTAAAAGCAGCATATATTTGGGAGATAAATACAGAAAGTCAAGGTACTCCAGACCAAATGAAACAAATT
GTCGGTATCGTGGAAAAAGAAAAAGTGCCTAATTTATTTGTCGAAACAAGCGTAGATCCACGTAGTATGGAAAGTGTATC
TAAAGAAACAGGCGTACCAATTTTCGCAAAAATCTTCACGGACTCCACTGCAAAAAAAGGTGAAGTGGGCGACACGTATT
TAGAAATGATGCAATACAATTTAGATAAAATTCATGATGGTTTAGCCAAATAA

Protein sequence :
MKKIIVVALFALVVVLAGCSSQNSDSKKTDGKLNVVATYSILADIVKNVGGDKIELHSIVPVGVDPHEYDPLPANIQSAA
DADLIFYNGLNLETGNGWFDRMLETADKSRDDKEQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALV
KADPDNADFYKENAKKYINKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYIWEINTESQGTPDQMKQI
VGIVEKEKVPNLFVETSVDPRSMESVSKETGVPIFAKIFTDSTAKKGEVGDTYLEMMQYNLDKIHDGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 6e-78 55
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 4e-78 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOf2365_1875 YP_014468.1 manganese ABC transporter VFG2157 Protein 3e-134 99
LMOf2365_1875 YP_014468.1 manganese ABC transporter VFG2165 Protein 4e-83 61
LMOf2365_1875 YP_014468.1 manganese ABC transporter VFG1359 Protein 3e-78 54