Gene Information

Name : polA (LMOf2365_1587)
Accession : YP_014185.1
Strain : Listeria monocytogenes F2365
Genome accession: NC_002973
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : -
Position : 1581528 - 1584155 bp
Length : 2628 bp
Strand : -
Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair

DNA sequence :
GTGAATAAATTAGTATTAATTGATGGAAATAGTATTGCGAATCGCGCCTTTTATGCTTTACCGCTTTTAAATAATGATAA
AGGTGTTTACACAAATGCGGTGTATGGTTTCGCAATGATGTTGATGAATGTACTCGAAAAAGAAAAACCTAGCCATGTGC
TCGTTGCATTTGATGCTGGAAAAACAACTTTCAGGCATACAACATTTAAAGGTTATAAAGGCGGACGTCAAAAAACCCCA
AGTGAGTTATCTGAACAGTTTCCATTCATCCGAGAACTTTTAACGGCGTATGATATCCCGCAATATGAACTTGCCAATTA
CGAGGCAGATGATATTATCGGAACATTGACGAAAAAAGCAGAAGCAGATGGAATGGAAGTAGCAATCATTACCGGAGACC
GCGACTTAACGCAATTAGCTTCTGAAAAAACAACGGTTTATATTACTAAAAAAGGCATAGCCGATATGGAAACCAACACA
CCAGAAACACTAAAAGAAAAATACAATCTGACTCCTGAACAAATCATTGATATGAAAGGCTTAATGGGTGATTCCTCCGA
TAATATTCCTGGTATTCCAGGCGTTGGTGAAAAAACTGCCTTAAAACTCTTACATGAATTTGGTGGAACGGTGGAAAGTG
TGTTAGAGCATGCCGAGGAAATTTCCGGTAAAAAACTAAAAGAAAAAGTACTGGAAAATAAAGAATTAGCTATTTTAAGT
AAAGAGTTAGCTACAATCAATGTGGATTCACCGATTGAATGCACGGTCGAAAGCACGAAATACGACGGCTATCAAACAGA
AAAAGTTATCCCTTTATTAAAAGAAATGAATTTTACAACACTTTTGAAAAATATCGAGGGAGATACACCAGAAGAAACGA
AAGAACTAAAAGAGTTGTCTTTTGAAATCGTAACAGAATTAAAAGAAAAACATTTTGGTGGGAAAACCGCGCTTTATGTG
GAGCTAGAAAACGATAATTACCATACAGCTAATTTCATTGGATTAACAGTACATTCTAGCCAAGGGACGTATTTCTTTAC
AAAAGAAACAGCCGAAAGTAGTGAGGTATTCCGCAAATGGGTAGAAAGTGATCAAACAAAAGTAGTGTACGATGCGAAGA
AAACAATGGTTGCAATGAACCGCATTGGTTTGGCCATTTCTGGTATCACCTTTGATATCATGTTAGCATCTTACTTGCTA
AATCCATCTGATTCGATTGATGACTTTACAAGTGTTGCAATACGACATGATTACACAGAAGTAGAAACAGATGAAGCAGT
CTACGGAAAAGGTGCTAAACGTAGCACTCCTGAAGAAAGCATTGTTGCGGCACACTTAGCTAGAAAAGCAGTGGCTATTG
CTGACTTAGAGAAAAGACTAGTTGATGATTTAGAAGAAAATGAACAACTAGCTTTGATGGAAGACCTTGAGCTACCTCTA
ACTTTTGTATTAGCAGAAATGGAAATGCAAGGGGTTAGTGTAGATACAGAACGTCTAGAGAATATGAAAGTGGAGCTAGC
GGGTAGACTGAAAACATTGGAAGAGTCGATCCATTCTCTAGCCGGCGAAGAATTCAATATTAATTCACCGAAACAACTAG
GTGTGATTTTATTTGAAAAGCTTGGTCTCCCAGCTGTCAAGAAAACAAAAACAGGTTATTCAACGGCTGCCGATGTACTG
GAAAGTTTATCTGGTAAACACGCGATTATTGATGAAATTTTGTTATATCGTCAACTTGGTAAAATTCAGTCCACTTATAT
CGAAGGGCTGCTTAAAGTGACAGATAAAGAAACACATAAAGTACACACACGTTTCAACCAAACATTAACGCAAACAGGAC
GCTTAAGTTCAGTTGATCCGAACTTGCAAAATATCCCTATTCGTTTAGAAGAAGGACGGAAAATTAGACAAGTTTTCGTA
CCGAGTAAACCAGGTTGGAAAATGTTTTCAGCCGATTATTCTCAAGTAGAGCTGAGAGTCTTAGCACATATTTCGGAAGA
TGAAAATTTAATTTATGCATTTAAGCACGATTATGATATTCATACGAAAACGGCGATGGACGTGTTTCATGTTGAGCAAG
ACGAAGTGGATTCATTAATGCGTCGTCAGGCTAAAGCGGTAAACTTTGGTATTGTATATGGAATTAGTGATTATGGGCTT
TCGCAAAATCTTGGTATTACGCGTAAAGAAGCAAAAGACTTTATTGATCGTTATTTTGTGAGCTATCCAGCCGTGAAAGA
ATATATGCAAGACATCGTTCGTTTTGCGAAAGAAAAAGGCTATGTAGAGACCATTTTACATCGTCGTCGGTATATTCCAG
AGATTGTCAGTCGTAATTTTAATGTTCGCGGATTTGCAGAAAGAACGGCGATGAACACGCCTATTCAAGGTAGTGCCGCT
GATATTATCAAAAAAGCGATGATTCTGATGAGCGAGCGTTTAGTATCTGAAAAATTAGAAGCAAAATTATTACTACAAGT
ACACGATGAATTAATCTTCGAGGCGCCTGAAGCTGAAATCGCTAAATTAGAAGAAATTGTCCCAGATGTTATGGAAAATG
CAGTAGAGCTTTCTGTACCGCTAAAAGTAGATAGCGCATTTGGTGACACTTGGTACGACGCGAAATAA

Protein sequence :
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAGKTTFRHTTFKGYKGGRQKTP
SELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNT
PETLKEKYNLTPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS
KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEETKELKELSFEIVTELKEKHFGGKTALYV
ELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEVFRKWVESDQTKVVYDAKKTMVAMNRIGLAISGITFDIMLASYLL
NPSDSIDDFTSVAIRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEENEQLALMEDLELPL
TFVLAEMEMQGVSVDTERLENMKVELAGRLKTLEESIHSLAGEEFNINSPKQLGVILFEKLGLPAVKKTKTGYSTAADVL
ESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFV
PSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTAMNTPIQGSAA
DIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 50