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Name : LMOf2365_1452 (LMOf2365_1452) Accession : YP_014050.1 Strain : Listeria monocytogenes F2365 Genome accession: NC_002973 Putative virulence/resistance : Unknown Product : pyridine nucleotide-disulfide oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 1443909 - 1445249 bp Length : 1341 bp Strand : - Note : identified by match to protein family HMM PF00070; match to protein family HMM PF02852 DNA sequence : ATGGCAAAATTTACATATGATGTAGTAATAATCGGAAGTGGCGCAAGTGGTACAACGGTAGCATTTGAAGCACAGGCAGC TGGATTAAAAGTAGCAATTGTAGAGGAGCGGAGTTGGGGTGGAACGTGTGTCCTCAGAGGATGCGACCCTAAAAAAGTTC TCGTCGGAGCAAGAGAAGCAAGAAATCTTTCTACCAGACTTCGCGGCAAAGGTATTAAGCAAGCAGCGACAATTAGCTGG ACAGATTTAATGGCATTTAAAGAAACTTTTGTTGAGAATGTGCCAGAAAGTCGTTTGGAAAACTTTCAAGAAGCCGGGAT TGAAACATTCTTTGGTGCAGCTAGTATCCAAGATTCCCATTCCTTACAAGTCGGCGATGATTTAATACAAGCTAATAAAA TTGTCATCGCAACAGGAGCAACACCAAGCACGTTAAAAGTAGAAGGGCAAGAATACATTCAAACCAGTGATGATTTTTTA TCACTTGAAAAACTCCCTGATTCTGTCGTGTTTATTGGTGGTGGCTATATTTCATTTGAATTTGCCTCCATAGCACTCGC AACAGGGAGAGAAGTGCATATTATCCACCATAATAGTGAACCTTTAAAAAAATTTGATCCTGATTTCGTGGCTGCATTAG TGTCCAATATGAAAGAAGAAGGTATCCATTTCCATTTTGACACAGATATTACGAAGGTTGAAAATAAAGGGGAAAAACTG CATATTCATGGCAAAGATGGATTTTCATTACAGACAGATTTAATTATTGGGGCAACTGGTAGAAAACCAAATATCGCGCA TTTATCATTGGAAAATGCCAACATTGACTACACTAAAAAAGGCATTATCGTTAATGAAAAACTTCAAACCACTAATAACC CTCATATCTACGCATGTGGCGATGTCGCGGCAACAAAAGGAGCACCTTTAACACCCGTTGTCAGCATGGAAGCAGCATTT GTTGCTAAAAATGTTATTGGCGGCGACGAAAAAATGATTTATCCAGCAATACCAAGCGTCGTTTTTACGAGCCCCAAACT GGCAAGCATTGGTATAAGCGCAGAAGAAGCAAAAGCGCATCCAGAAAAATATCAAATTAAAAATCACGACACAACAAATT GGTATACTTATAAACGAACAAATGAACAAATCGCGCTTGCAAAAATCATTGAAGATAGAGAGTCGGGGCAAATCAAAGGC GCTCATTTTCTTAGTGAAGAAGCAGATTATATGATAAATTACGTTGCCATCTTAATGAAAGCTAATCTAACTTTGTCTGA TTTACAATCTGTTATATTTGCCTATCCATCTCCAGCAAGTGACTTAACTGCTTTGAACTAG Protein sequence : MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREARNLSTRLRGKGIKQAATISW TDLMAFKETFVENVPESRLENFQEAGIETFFGAASIQDSHSLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFL SLEKLPDSVVFIGGGYISFEFASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL HIHGKDGFSLQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIYACGDVAATKGAPLTPVVSMEAAF VAKNVIGGDEKMIYPAIPSVVFTSPKLASIGISAEEAKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKG AHFLSEEADYMINYVAILMKANLTLSDLQSVIFAYPSPASDLTALN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| merR | BAB47647.1 | regulatory protein | Not tested | Type-III SCCmec | Protein | 8e-91 | 44 |
| SE0080 | NP_763635.1 | regulatory protein | Not tested | SCCpbp4 | Protein | 1e-90 | 44 |
