|
Name : LMOf2365_1396 (LMOf2365_1396) Accession : YP_013994.1 Strain : Listeria monocytogenes F2365 Genome accession: NC_002973 Putative virulence/resistance : Virulence Product : DNA-binding response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1382264 - 1382944 bp Length : 681 bp Strand : + Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486 DNA sequence : ATGAATAGAATATTAATCGTAGAAGATGAAAAAAACTTAGCACGCTTTATCGAACTCGAATTACAACATGAAAATTATGA AACAGCGGTTGCTAATGATGGACGTGCTGGACTAGAACTCGCACTTAATGAAGAATGGGATGCTATTTTACTCGATCTAA TGTTGCCGCATTTAAACGGTGTAGAAGTTTGTCGCCGTGTACGCCAAGTGAAACAAACACCCATTATTATGATAACCGCA CGTGACTCTGTTATCGACCGTGTATCCGGACTGGATCACGGAGCAGATGATTACATCGTCAAACCCTTCGCTATTGAAGA ATTACTTGCGCGCCTTCGCTCGCTATTGCGTCGGGTGGAAAATGCAGAACAATCTGCTAAACAAACAACGCTACAGTATC GTAATCTAATTGTTGAAAAGGAAAATCGCATTGTCAAACGCGACGAAGAAATCATTGACTTAACAAAACGAGAGTATGAA CTTTTACTTACGTTAATGGAAAATGTTAATATCGTTCTTACGCGGGAAGTGTTACTCAATAAAGTATGGGGTTATGAAAC AGAAGTAGAAACAAATGTAGTGGATGTGTACGTTCGTTACTTACGAAATAAAATTGATCATCCTGACGAAGAAAGTTATA TCCAAACAGTTCGCGGGACAGGGTATGTGATGCGTACATGA Protein sequence : MNRILIVEDEKNLARFIELELQHENYETAVANDGRAGLELALNEEWDAILLDLMLPHLNGVEVCRRVRQVKQTPIIMITA RDSVIDRVSGLDHGADDYIVKPFAIEELLARLRSLLRRVENAEQSAKQTTLQYRNLIVEKENRIVKRDEEIIDLTKREYE LLLTLMENVNIVLTREVLLNKVWGYETEVETNVVDVYVRYLRNKIDHPDEESYIQTVRGTGYVMRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 3e-31 | 41 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 4e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | HE999704.1.gene1528. | Protein | 3e-94 | 100 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | AE015929.1.gene1106. | Protein | 3e-47 | 56 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | NC_003923.1003417.p0 | Protein | 3e-49 | 55 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | NC_013450.8614146.p0 | Protein | 3e-49 | 55 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | NC_002951.3238224.p0 | Protein | 3e-49 | 55 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | NC_007793.3914065.p0 | Protein | 3e-49 | 55 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | NC_002758.1121390.p0 | Protein | 3e-49 | 55 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | NC_010079.5776364.p0 | Protein | 3e-49 | 55 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | NC_002952.2859858.p0 | Protein | 3e-49 | 55 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | NC_007622.3794948.p0 | Protein | 3e-49 | 55 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | BAC0308 | Protein | 2e-31 | 43 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | BAC0125 | Protein | 5e-31 | 42 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | NC_012469.1.7685629. | Protein | 7e-37 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | VFG1390 | Protein | 6e-40 | 44 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | VFG1389 | Protein | 5e-32 | 43 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | VFG1563 | Protein | 2e-31 | 41 |
| LMOf2365_1396 | YP_013994.1 | DNA-binding response regulator | VFG1702 | Protein | 1e-31 | 41 |
