|
Name : arsB (LMOf2365_1318) Accession : YP_013916.1 Strain : Listeria monocytogenes F2365 Genome accession: NC_002973 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1308907 - 1310202 bp Length : 1296 bp Strand : + Note : identified by similarity to SP:P30329; match to protein family HMM PF02040; match to protein family HMM TIGR00935 DNA sequence : ATGCAGATTACTTTAGCTATTTTAGTATTTGCCTTCACATTATTTTTTGTGATTTGGCAACCAAGAAAATTATCAATCGG ATGGTCAGCTTGCGGAGGTGCGCTAATTGCCATATTACTTGGCGTCGTCACTTTATCAGATGTCGCAACAGTTACTGGAA TTGTTTGGAATGCGACGCTCGCTTTTATTGCTATTATAATTATTTCATTGATTTTAGATAAAATTGGCTTTTTTGAGTGG GCGGCTTTACATATGGCGCGATTAGCAAGAGGTAATGGGTTATTAATGTTTATTCTTATTTCTATTTTGGGAGCTTTCGT TGCTGCGTTGTTTGCTAATGACGGGGCGGCGCTAATTTTGACACCAATTGTTCTAGCGATGGTGCGAGCGCTGAATTTTG ATGAGAAAAAGGTATTTCCATTTATTATTGCTAGCGGTTTTATAGCAGATACGACGTCCTTGCCGCTCGTAGTTAGTAAT TTAGTCAATATAGTTTCGGCTGATTTTTTCGGCATTAGTTTTTCGCAGTATGCGCTTATTATGTGGATTCCAACGCTTTT CTCTTTAGTTGCGAGTATTTTAATCTTATATTTTTATTTTCGGAAAGCATTACCTAAAAAATATGATACGCGAGTGATTC GAGAGCCGGCTTCTGCAATTAAAGATAAAAAGATGTTTCGTGTTTCTTGGGGAATACTTATCATCCTTGTAGCAGGCTAT TTTTTGAGTAGTTTTTTAGATATTCCAGTGTCATTTATTGCCTTGCTAGTTGCTGTTATCTTTTTGTTAGTCAGTGCAAA AAGTCATGCGGTCTCGACAAAAGCTATTTTAAAAGGAGCACCTTGGAATATTGTGTTTTTCTCGGTTGGTATGTATGTAG TTGTATATGGTTTGCAAAATGTCGGTATCACAAAATTATTATCAGAAGCAATTACATATGTTGCGCACTTTGGTTTATTT GCGGGAACAGTTGGAATGGGATTTATTGCTGCAATACTGTCTTCTGTCATGAATAATTTGCCAACAGTAATGATAAATGC ACTTGCAATCGATCATACGTCATTTACAGGCGTGATGAAAGAAGCGTTAGTCTATGCAAATGTCATTGGTTCTGATTTAG GTCCGAAAATAACACCAATTGGCTCGCTAGCAACTTTACTTTGGCTACATGTTCTAGCGCAGAAAGGGATAAAGATAAGC TGGGGCTCTTATTTCAAAATTGGCATTGTGATTACTATTCCAGTTTTATTCATAACGCTCGTCGGACTATATTTTTCACT GCTTATTTGGAATTAA Protein sequence : MQITLAILVFAFTLFFVIWQPRKLSIGWSACGGALIAILLGVVTLSDVATVTGIVWNATLAFIAIIIISLILDKIGFFEW AALHMARLARGNGLLMFILISILGAFVAALFANDGAALILTPIVLAMVRALNFDEKKVFPFIIASGFIADTTSLPLVVSN LVNIVSADFFGISFSQYALIMWIPTLFSLVASILILYFYFRKALPKKYDTRVIREPASAIKDKKMFRVSWGILIILVAGY FLSSFLDIPVSFIALLVAVIFLLVSAKSHAVSTKAILKGAPWNIVFFSVGMYVVVYGLQNVGITKLLSEAITYVAHFGLF AGTVGMGFIAAILSSVMNNLPTVMINALAIDHTSFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVLAQKGIKIS WGSYFKIGIVITIPVLFITLVGLYFSLLIWN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 7e-125 | 67 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 3e-120 | 66 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 2e-120 | 66 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 4e-98 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| arsB | YP_013916.1 | arsenical pump membrane protein | BAC0574 | Protein | 1e-122 | 67 |
| arsB | YP_013916.1 | arsenical pump membrane protein | BAC0575 | Protein | 2e-121 | 66 |
| arsB | YP_013916.1 | arsenical pump membrane protein | BAC0576 | Protein | 6e-99 | 58 |
| arsB | YP_013916.1 | arsenical pump membrane protein | BAC0578 | Protein | 1e-98 | 58 |
| arsB | YP_013916.1 | arsenical pump membrane protein | BAC0577 | Protein | 6e-99 | 57 |
| arsB | YP_013916.1 | arsenical pump membrane protein | BAC0031 | Protein | 1e-95 | 56 |
