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Name : treC-2 (LMOf2365_1271) Accession : YP_013869.1 Strain : Listeria monocytogenes F2365 Genome accession: NC_002973 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1260359 - 1262005 bp Length : 1647 bp Strand : - Note : identified by similarity to SP:P28904; match to protein family HMM PF00128 DNA sequence : ATGACAAAGTTTGCTCAAAAAACAATTTATCAAGTGTATCCGAAATCCTTTTATGATACGACTGGCGATGGTACTGGGGA TATTCCCGGTATCACTGCCAAGCTTGATTATTTACAAAAACTCGGAATTGAGATGATTTGGCTGAATCCATTTTATCCTT CTCCGCAAAATGATAACGGCTATGATATCGCTGACTATACCGCGGTTGATCCTTTATTTGGTACGATGGACGATGTGACA ACGCTTATCAAGGAAGCGAAAAAAAGAAATATTGGTATTATGATTGACTTAGTATTGAATCATACTTCGACAGAGCATCC TTGGTTTAAAAAAGCGCTTGCTGGTGATCCATTCTATCGTGATTTTTACTATTTCCGCCCAGCAAAAGCCGATGGTTCCC CTCCAACAAATTGGGTTTCCAAATTCGGTGGTAATGCTTGGGAAAAATTGCCTGACTCCTCTGAGTACTATTTGCATTTA TACGATGTTACGCAAGCTGATTTAGACTGGGCCAATCCGAATGTACGCGAGGCACTCTTTGATGTCGTGAATTTTTGGAT TGATAAAGGCGTGGAAGGTTTTCGTTTAGATGTATTAAATGTGATTGCCAAACCTAAGTTTTTAGAAGATGATTTTGAAG GCGACGGCCGCCGTTTTTATACAGATGGACCAGGAATACATGCTTACTTAAAAGAACTACATGAACGAACTTTTGGCGAC AAGCCAATTATAACGGTTGGAGAAATGTCCTCTACAGATATTGACAACTGCATTCGTTATAGTAATCCAGACGAAAAAGA ATTATCGATGGTTTTTCATTTCCATCATTTGAAGGTAGATTATCCTGATGGAGAAAAATGGCGTTTAGCGGATGTGAATT TCGAGAACTTAAAATCTATTTTCCATATGTGGCAAGTCGCGATGTCAGAAGAAAATGGATGGGATGCGCTTTTCTGGAAC AACCATGACCAACCTCGAGCACTTGGTCGCTTTGCTTCCGACAAACCGGAACATTATTATCATTCGGCAACCCTCCTTGG CGCAACGATTCACTTTATGCGCGGGACACCGTTTGTTTATATGGGGGAAGAAATCGGGATGATGAATCCAAAATTTCCTA CGATTGATGATTATGTGGATGTGGAAACGCTCAACCATTTTGATATTTTACAAAAAAACGGACTTAGTGAGCAAGAAGTT ATGGCGATTATCAAAGAGCGTTCGCGAGATAATAGTCGGACACCTATGCAATGGGATGATTCGCAAAATGCTGGCTTTAC AACTGGTACTCCATGGCTAAAAGTAGCGGATAATGCAAGTGAAATAAATGTTCAAGCAGCCTTATCTAATAAAACGAGCA TTTTCTATTTTTACCAAAAGCTTATTGCATTACGGAAAGAATACCCTGTCATTCAGACGGGTGATTATACGCCATATTGG ACGGATGAAGATTTGATTATTGCCTATAAGCGTTCAAATGAAATTACTTCGCTTCTTTCCATTCACCATTTTGGCTCGAC TACGAAAAAAATTCAACTACCAAATGAGTTTTTAAATGCTAAAGTACTTCTTTCTAATTATGAACGTCAAACAATCAGTT CTGAGCTGGAATTAGCACCTTATGAAACATTAACTTTAATTCGATAA Protein sequence : MTKFAQKTIYQVYPKSFYDTTGDGTGDIPGITAKLDYLQKLGIEMIWLNPFYPSPQNDNGYDIADYTAVDPLFGTMDDVT TLIKEAKKRNIGIMIDLVLNHTSTEHPWFKKALAGDPFYRDFYYFRPAKADGSPPTNWVSKFGGNAWEKLPDSSEYYLHL YDVTQADLDWANPNVREALFDVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGRRFYTDGPGIHAYLKELHERTFGD KPIITVGEMSSTDIDNCIRYSNPDEKELSMVFHFHHLKVDYPDGEKWRLADVNFENLKSIFHMWQVAMSEENGWDALFWN NHDQPRALGRFASDKPEHYYHSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTIDDYVDVETLNHFDILQKNGLSEQEV MAIIKERSRDNSRTPMQWDDSQNAGFTTGTPWLKVADNASEINVQAALSNKTSIFYFYQKLIALRKEYPVIQTGDYTPYW TDEDLIIAYKRSNEITSLLSIHHFGSTTKKIQLPNEFLNAKVLLSNYERQTISSELELAPYETLTLIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-107 | 42 |
