Gene Information

Name : argF (TDE0929)
Accession : NP_971539.1
Strain : Treponema denticola ATCC 35405
Genome accession: NC_002967
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 951809 - 952825 bp
Length : 1017 bp
Strand : -
Note : catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway

DNA sequence :
ATGCTTAAAGAAATTCGCGGAAAGAGCGCAAAAAACTTGCGCGGAAGAAGCTTTCTAAAATTGTTGGATTTTACTACAGA
CGAAATCCGCTATTTACTTGACCTTTCAAAAAATTTTAAAGACATGAAAAGGGCCGGAATTCCTCACAGATACCTAGAAG
GAAAAAACATCGTTCTTCTTTTTGAAAAAACCTCTACAAGAACACGATGCTCTTTTGAAGTTGCAGGTTATGACCTTGGA
ATGGGCGTTACCTACCTTGATCCCAATTCTTCACAGATGGGACATAAAGAATCTATCGAAGACACAGCCCGTGTTTTAGG
CAGAATGTATGACGGTATCGAGTACAGAGGCTTCAGCCAAGAGCTTGTAGAAACATTGGCCGAATATTCCGGTGTTCCCG
TATGGAACGGATTAACCGACCTTTTCCACCCGACTCAAATGCTTGCAGACCTTCTTACAATCGAAGAAAAATTCGGCTAT
TTGAAAGGACTTAAATTTACATACATGGGAGATGCACGAAACAACGTAGCCAACTCCCTCATGATAGCCTGCGTAAAAAT
GGGAATGCACTTTACGGCATGTTCACCCAAGCACCTCTTCCCCACTGAAGACTTGGTAGCCGAAGCAAAGAAAATAGCTG
CCCAAACAGGCGGAAGCGTAACCCTTACCGAAAACGTAAGCGAAGGCACAAAAGGCGCTCATGTTCTTTATACCGACATT
TGGGTATCTATGGGAGAACCCGACAGCGTATGGGAAGAACGCATTAAGCTCTTAAAGCCCTATCAGGTAAACAAGGCCGC
TATGGACAATGCAGACAAGGATGCAATCTTCTTGCACTGCCTCCCCTCCTTCCATGACTTAAAGACAACTAAGGGTCAGG
AGATTAACAAAAAGTTCGGTCTTCCCGAAATGGAAGTTACAAACGAGGTTTTTGAATCTCATAAATCAGTTGTTTTTGAT
GAAGCCGAAAACCGCATGCATACAATCAAGGCTGTTATGTATGCCACAATGTGCTAA

Protein sequence :
MLKEIRGKSAKNLRGRSFLKLLDFTTDEIRYLLDLSKNFKDMKRAGIPHRYLEGKNIVLLFEKTSTRTRCSFEVAGYDLG
MGVTYLDPNSSQMGHKESIEDTARVLGRMYDGIEYRGFSQELVETLAEYSGVPVWNGLTDLFHPTQMLADLLTIEEKFGY
LKGLKFTYMGDARNNVANSLMIACVKMGMHFTACSPKHLFPTEDLVAEAKKIAAQTGGSVTLTENVSEGTKGAHVLYTDI
WVSMGEPDSVWEERIKLLKPYQVNKAAMDNADKDAIFLHCLPSFHDLKTTKGQEINKKFGLPEMEVTNEVFESHKSVVFD
EAENRMHTIKAVMYATMC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-91 63
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 2e-91 62
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-91 62
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-91 62
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-91 62
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-91 62
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-91 62