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Name : TDE0924 (TDE0924) Accession : NP_971534.1 Strain : Treponema denticola ATCC 35405 Genome accession: NC_002967 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 945841 - 947724 bp Length : 1884 bp Strand : - Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664 DNA sequence : ATGAATGATAAACAAAACCGGCCGGCACAGAAAAATACTGAACGAGACCCGGCAAAGCAGCAGGCGGAACGAAACCCTGC AAAACAGAAAACCATCAAGCGACTTTTAAGCTACGCGGGAAAAAGCAGAGGGCTTTTGCCACTGTCGCTTATGCTTTCAG GCTTGAGTGCCCTTGTGAGCTTTGTGCCGTACATTATGGTGTTCTTTGTAATGCGCGATGTGATTGCCGCCGCCGTAGCA AAAGAAGCGGTAAACGCCGCCTCCCTTACACGCTACGGACTGTGGGCAGTCGGCTCCGCGGCGGCGGGCTTTGTGTTGTA TTATGCAGCGCTCATGCTTTCGCATGCGACGGCATTTACCATTCAAGAAAACCTTTCGATACGGATGGCCGAAGCACTGG CGGAACTTCCCATCGGCTGGCATATCACGCACGTAAGCGGCAAGGTGCGCAAAGTGTTTGAAAAAAACGTCAATCAACTT GAAACGCTCATCGCTCATAACCTGCCCGATACGGCACAGAACATGGTGTCTCCTTTTGCGATACTCGCGCTCATGTTGGT ATTCGATTGGCGGCTCGGACTTATTTCCCTATTGCCGCTTGTGCTTGCTTTCGTGCTGCAAGCGGTTTTAATGCAAATCA GTTCAAATTCCGGCTTTATGCAAAAGTACGAAAATGCACTTGAGCAGATGAACAATGCGGGCACCGAATACGTACGCGGC ATTTCGGTTATCAAAACCTTTAATCAGTCCGTGTATTATTTCAAAAACTTTTACACTTCTATTATGAACTACAAAGAATT TGTGTATAAATATTCGCTGTCGTGGGAAAACGGCTATTCGATTTTCCTCGCACTCGTTAAAGCGGGCTTTCTATTCCTGC TGCCTGCCGCTCTGTTGATAGCGGGCAGTGCGACGCTCGATCCTCGCTTTTTTTACAGTTTTGTGTTTTATCTTGCCTTT GCACCGGTTACCTACACCATGCTGATGAAAGTTATGTATGCAAATTCATTCAATCAGCGCTCAAACGATGCGCTCAACCG TATTGAAGATATCTTGCAAGCGCCGCTGACCAAAGAACCGGAAAAGTCCGTATTGCCCGAAAAATACGATATAGAATTTA GAGACGTAGTGTTTTCTTATAAAACGGAAACGGCGGGATCTGCGGAAACGGACACAGGGAACAAGGGCCGCGCCACAGTG AACGGCATCAGCTTGCATATTCCCGAACATTCGCTTACCGCTCTTGTCGGACCTTCAGGTGGAGGCAAAACGACCCTCGT CAATTTGCTCGGCCGCTTTTGGGAAATTGATTCAGGGGAAATCAGTATCGGCGGTGTCGATATCCGCGACATTAAAACAA GCGACCTTTTGCACACCGTCGGCTTTGTGTTTCAAGAAAATAAGCTCTTTAAAGAAAGTATTTTTGAAAACATCCGCTAC GGCAAAAAAGACGCAAGCCGAGAAGAAGTGATGGAAGCCCTCCGTAAAGCCGAGTGCATGGACATCATCGAAAAACTGCC TGCCGGTATCGACACCGTGTACGGAACTAAGGGCACATACGTATCAGGCGGAGAAGCACAGAGGCTTGCCATTGCCCGCA CCCTCTTGCAGGACGCACCGATTATCGTGCTGGACGAAGCAACCGCCTTTGCCGACGCCGAAAACGAACACAAAATCAAA AAGACATTCGACGTACTGCTCAAAGATAAAACCGTCATCATGATCGCCCACCGCCTCTCTTCGGTTGTAAACGCCGATAA AATCTGTGTCATCAACGAGGGCAAAATTGAAGAAGAAGGCACGCACACCGAACTGCTCGCACGGAAGGGCTTGTACGCAA GTATGTGGGATAATTTCCAAAAAGGCATCGAGTGGAAAGTATAG Protein sequence : MNDKQNRPAQKNTERDPAKQQAERNPAKQKTIKRLLSYAGKSRGLLPLSLMLSGLSALVSFVPYIMVFFVMRDVIAAAVA KEAVNAASLTRYGLWAVGSAAAGFVLYYAALMLSHATAFTIQENLSIRMAEALAELPIGWHITHVSGKVRKVFEKNVNQL ETLIAHNLPDTAQNMVSPFAILALMLVFDWRLGLISLLPLVLAFVLQAVLMQISSNSGFMQKYENALEQMNNAGTEYVRG ISVIKTFNQSVYYFKNFYTSIMNYKEFVYKYSLSWENGYSIFLALVKAGFLFLLPAALLIAGSATLDPRFFYSFVFYLAF APVTYTMLMKVMYANSFNQRSNDALNRIEDILQAPLTKEPEKSVLPEKYDIEFRDVVFSYKTETAGSAETDTGNKGRATV NGISLHIPEHSLTALVGPSGGGKTTLVNLLGRFWEIDSGEISIGGVDIRDIKTSDLLHTVGFVFQENKLFKESIFENIRY GKKDASREEVMEALRKAECMDIIEKLPAGIDTVYGTKGTYVSGGEAQRLAIARTLLQDAPIIVLDEATAFADAENEHKIK KTFDVLLKDKTVIMIAHRLSSVVNADKICVINEGKIEEEGTHTELLARKGLYASMWDNFQKGIEWKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-107 | 41 |
