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Name : rplS (TDE0885) Accession : NP_971495.1 Strain : Treponema denticola ATCC 35405 Genome accession: NC_002967 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 903085 - 903444 bp Length : 360 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAGTGATCTGATTATGAAAATTGAAGCTCAGCAAAAGGCTGAAAACCCTCCCGTTTTCCGTGTAGGAGATACGGTTAA AGTTCACTTTAAAATCGTTGAAGGAAAGACCGAGCGAATTCAGGTTTATGAAGGCTTGGTAATCTGTTTTAAAAATTCCG GAATCGGAAGAACATTTACCGTACGAAAAAATTCTTACGGTGTAGGGGTTGAACGAGTTTTCCCCCTTCATTCACCTCGA ATTGCTAAGGTTGAAGTTGTACGCCCCGGAAAGGTACGCCGAGCTAAACTTTACTATATCAGGGATAAGGTAGGTAAGGC TGCTAAGATTAAGACCCTTATCACCAAAAAGAACTCATAA Protein sequence : MSDLIMKIEAQQKAENPPVFRVGDTVKVHFKIVEGKTERIQVYEGLVICFKNSGIGRTFTVRKNSYGVGVERVFPLHSPR IAKVEVVRPGKVRRAKLYYIRDKVGKAAKIKTLITKKNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 1e-25 | 61 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 5e-22 | 52 |
