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Name : TDE0714 (TDE0714) Accession : NP_971326.1 Strain : Treponema denticola ATCC 35405 Genome accession: NC_002967 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 747773 - 749260 bp Length : 1488 bp Strand : + Note : identified by similarity to OMNI:TP0077; match to protein family HMM PF02719 DNA sequence : ATGAACCGTCCTATTAAACAAAAAACTTCTATATATATAGTAGGCGCAGGTCTGGCCGGAACTATGATTGCACATGAAAT TTCTGAAAAAAACATATTCGGTAAGGTTGCCGCATTCTTAGACGATGACCCTAAAAAAATCGGAACTAAGATTGACGGGA TTCCGGTATTCGGGCCTATAAGTGAAACGGTTCATCTGATAAGGATAGATGCAGGGGATGAGGCTCTGATTGCAATTCCC AGCATGCGCTCCGAGCGTTTGCGTGAAATATATGAGCTTTTAAAATCGGCAGGTTTTTCAAAAATAAAACTTCTGCCCGC AATTTCGCAAATCATTGACGGTTCAGCTCATTTGGTACAAGCCCGCGAAATAGATCCGCAGGATTTACTTACCCGAACCC CCGTTACCATTTCTTTAAAAAAGAGTTTGGCTTATCTACGCGGAAAGCGAGTTCTAATTACCGGCGCCGGAGGTTCTATC GGAAGCGAACTCTGCCGGCAGCTTTTATCGGGCGGTGCCGAACGCCTCTATCTTTTCGGTCATGGAGAAAATTCCATTTA TCAAATTTATAAAGAACTTAAAATATTGCAAGCAGGCGGTGTCGGCGACAAGGCTACAATTGTTCCGGTTATAGGAGAGT TAAAAGACCGCGAGTACATGCGCTACATCATTAAGCAATTAAAATGTGATGCGGTTTTTCATACGGCGGCTTATAAACAT GTTCCTTTGATGGAAGAAAATCCTGTTGCGGTTATCGAAAACAATGTTTTCGGAACAAAGAATCTTTTGGATGCCTGCAT CGAATTCGGAGTAAAACGATTTGTTTTAATTTCGACGGATAAGGCTGTTGAGCCTGTTTCGGTTTACGGCGTTTCAAAAC TATTAAGCGAAAAATTGGTATTGCAGGCTGCCGAAACCGTAAAAGAAAAAAAAGATTCAGCCTACATGTTTGTCCGCTTC GGAAATGTTTTGGGATCGAGGGGATCTATCTTTCCGCTTTTTGTAGAGCAGATACAAAACGGGGGACCCGTAACCGTAAC CGATAAAAAGATGATCCGCTTTTTTATGACAATTCCGGAAGCTTGTTCATTAGTATTGCAGACAGGCGGTGTTGGAAAAT CGGGTGAGTCCTATCTTCTCGACATGGGAGAACCTGTAAATATTTATGAGACGGCAAAGCAGTTGATAAGTTACATGGGT TTTGAACCTGAGAAGGATATTAAGATAGAAATAATCGGCCCCAGAGAAGGCGAGCGTTTGGAAGAGCCTCTTTGGTCATC AACCGAGTATCTTGAAAAAACGGATTACGAAAAAATCATGCGCTTACGTGATAAAAAAGAATTCGATTCTAAAAACTTAA ATGAAATTTTAAATACCCTATATCCGTTTTGTTTTTATAGTGAAGAACACAAAGACGATTTCCGCAATAAAGAAAAGATG CGCAATTTTTTGGAAGAAAATAAATTATTAATTTATAAAAAGGAGTAA Protein sequence : MNRPIKQKTSIYIVGAGLAGTMIAHEISEKNIFGKVAAFLDDDPKKIGTKIDGIPVFGPISETVHLIRIDAGDEALIAIP SMRSERLREIYELLKSAGFSKIKLLPAISQIIDGSAHLVQAREIDPQDLLTRTPVTISLKKSLAYLRGKRVLITGAGGSI GSELCRQLLSGGAERLYLFGHGENSIYQIYKELKILQAGGVGDKATIVPVIGELKDREYMRYIIKQLKCDAVFHTAAYKH VPLMEENPVAVIENNVFGTKNLLDACIEFGVKRFVLISTDKAVEPVSVYGVSKLLSEKLVLQAAETVKEKKDSAYMFVRF GNVLGSRGSIFPLFVEQIQNGGPVTVTDKKMIRFFMTIPEACSLVLQTGGVGKSGESYLLDMGEPVNIYETAKQLISYMG FEPEKDIKIEIIGPREGERLEEPLWSSTEYLEKTDYEKIMRLRDKKEFDSKNLNEILNTLYPFCFYSEEHKDDFRNKEKM RNFLEENKLLIYKKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-65 | 42 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-63 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TDE0714 | NP_971326.1 | capsular polysaccharide biosynthesis protein | VFG1300 | Protein | 2e-67 | 44 |
