|
Name : TDE2036 (TDE2036) Accession : NP_972639.1 Strain : Treponema denticola ATCC 35405 Genome accession: NC_002967 Putative virulence/resistance : Virulence Product : AAA ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2064230 - 2066728 bp Length : 2499 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861 DNA sequence : ATGTGTCAAGGTCTTTCACAAGATGCTCATAAGCTGCTTACTCTTTTTGGTCAGCAGGAAGCCAGGCGGGTTAATGCGGA TCTGTTTCAACCCGAGCATATTTTATCTGCTTTGATCCGCAATAAGGTAGGCAGGGGTTATATAATTCTTCAAAAATTAA ATATTGATATTCTCAATTTACAGTTATTTATAGAACAGAACACTCCTATCCGTACAGGGGATAGAATCATAGGTGAAATT CCTCCTTCTCGAAGAATAAAGACTTTGGTCGATATTGCAACAATAGAAGCAAGGACTATGAGGCAAAGTGTTGTCGGTAC CGAGCATCTTCTTGTAGCCCTCGTCAGAGAAGAAAATTCCATAATATCCGATTTTTTTATGCGGTATAATATCGTGACTG AAGACATAAGGATGATAATATTAAAAATAACCGATCAGATGGATTCTGTCCGAACCGCTAAAGCAGCCGACGTGTCGAAG TCAAAATCATCGGCTCTTTCCGAATTTGGACGTAACCTGACCGATATTGTAAGTTCCGGCAGCCTTGACCCAATTATAGG CCGCGAAAAAGAGATTAGAAGACTTATCCAAATTCTTTCCCGCAGAACAAAAAATAATCCCATCCTTGTAGGAGAGCCCG GAATAGGAAAGACCTCCATCGTTGAAGGCTTGGCCTTTTCCATAATAAATGAAAACGTGCCTCACGATTTATTGAATAAA AGTATTGTTTCTTTGGATTTAGGTTCCGTAATTGCAGGAACAAAGTATAGAGGCCAGTTTGAAGAAAGACTGAAGCAAAT TATAAATGAAATAAAAGAGAATAAAAATATAATTTTGTTTATAGATGAAATTCATACCCTCATAGGTACCGGCGGCTCTC AGGGAGCGATGGACGCTGCCAATATTTTAAAGCCTGCCCTAGCCAGAGGCGAAATACAATGTATTGGAGCTACTACAGTT GACGAATACAGAAGATATTTTAAAAACGATTTAGCCCTTGAGCGGCGCTTTCAGTTGATTCAAGTTAAAGAACCGAATCC TGAAGAGACCTTTGATATACTATGCGGTATAAAACATAAGTATGAAGAACATCACAACGTCATCTATGAACCCCAGACTG TAACCAAGATAATTGAATATTCAAAACGGTATATCACGGATAGATTTTTTCCTGACAAGGCTATTGATGTATTGGATGAA GCAGGGGCAATGAAAAAAACTATCCTTGACAAAAAACCCGGCGAACTTTTTGAAATTGAAGACAAGATAAAGGTTTTGAT GCTTGAAAAAGCCGAGATGGTTGAGATGCAAAATTATGAAAAAGCAGCCTTAATCAGAGACGAAGTCCTTGAGCTAAAAA ACGATATATATCAAATTAAAAATAAGTGGATGACTTCTTATCAGCATCCTATTTCCTATGTTGATGAAAACGATATAGCA GAAGTTGTTGCAATGATGACGGATATCCCCGTAAATAAATTGAGCCAAGATGAGGCCGAAAGGATGCTTCATATTGAAGA TGAATTAAAAAAATCGGTGATAGGGCAAGATGAACCCATATCGATTTTATCCAATTCAATTAGAAGGTCCCGTGCAGGTA TTTCGTCTCCAGACAGACCCATAGGTTCATTTTTGTTTTTAGGCCCTACCGGTGTCGGAAAAACCCTTCTTGCAAAAACT CTCGCCGAATTTTTATTCGGCACAAAAGAAGCTTTAATCAGGGTTGATATGAGCGACTATATGGAAAAACATAATGCTGC AAAACTTATCGGAGCTCCTCCCGGATATGTCGGTTTTGATTCCGGCGGATTTTTAACCGAAAAAATAAGACGAAATCCGT ATTCCGTTTTGCTTTTGGATGAGGTAGAAAAAGCTCATCCCGATGTCTTTAATATTTTGTTACAAATTTTAGAAGAGGGT GAGCTTAGAGACAGCAGCGGACGCATCGTCAATTTTAAAAATACGGTTATTATTATGACCAGTAATGCAGGCTCCAAGTC CATCATAAAAGAAAATCAGTTAGGCTTTAATCTTTCGGGAGATGGTGTAATGGCCTATTCCGAGATAAGAGCAAGCGCTC TTAACGAAATAAAAAAATTCTTATCACCGGAATTTATAAATAGAATTGATGAGTTGCTTGTTTTTAAGCCCTTGGATAAG GATGACATCAAACGGATATTAAAGCTTGAGCTTAAAAAATTTGAAGATAGAATTGCAAAGCTGGATTTATATATTGAGCT TTCAAAAGAAGCCGAAGATTTCTTTGCAGATAAAGGATATGACCCTGCCTACGGTGCACGCCCTATGAGAAGACTTCTTC AAAATAAAATCGAAGATGTATTGTCCGTTAAAATAATAAGCGGAGAATTTTCAAAGGGTAAGACTGCCCTTGTAGATTTT TCGGCTTCAGAGAATGATATAATAATCGGCATTAAAGAAAATCCGAATTATGAAGGTGCTTACAGCGCACCAGTTAAATG TGAGGTCGAATCCAACTGA Protein sequence : MCQGLSQDAHKLLTLFGQQEARRVNADLFQPEHILSALIRNKVGRGYIILQKLNIDILNLQLFIEQNTPIRTGDRIIGEI PPSRRIKTLVDIATIEARTMRQSVVGTEHLLVALVREENSIISDFFMRYNIVTEDIRMIILKITDQMDSVRTAKAADVSK SKSSALSEFGRNLTDIVSSGSLDPIIGREKEIRRLIQILSRRTKNNPILVGEPGIGKTSIVEGLAFSIINENVPHDLLNK SIVSLDLGSVIAGTKYRGQFEERLKQIINEIKENKNIILFIDEIHTLIGTGGSQGAMDAANILKPALARGEIQCIGATTV DEYRRYFKNDLALERRFQLIQVKEPNPEETFDILCGIKHKYEEHHNVIYEPQTVTKIIEYSKRYITDRFFPDKAIDVLDE AGAMKKTILDKKPGELFEIEDKIKVLMLEKAEMVEMQNYEKAALIRDEVLELKNDIYQIKNKWMTSYQHPISYVDENDIA EVVAMMTDIPVNKLSQDEAERMLHIEDELKKSVIGQDEPISILSNSIRRSRAGISSPDRPIGSFLFLGPTGVGKTLLAKT LAEFLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGYVGFDSGGFLTEKIRRNPYSVLLLDEVEKAHPDVFNILLQILEEG ELRDSSGRIVNFKNTVIIMTSNAGSKSIIKENQLGFNLSGDGVMAYSEIRASALNEIKKFLSPEFINRIDELLVFKPLDK DDIKRILKLELKKFEDRIAKLDLYIELSKEAEDFFADKGYDPAYGARPMRRLLQNKIEDVLSVKIISGEFSKGKTALVDF SASENDIIIGIKENPNYEGAYSAPVKCEVESN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-158 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TDE2036 | NP_972639.1 | AAA ATPase | VFG0080 | Protein | 1e-145 | 51 |
| TDE2036 | NP_972639.1 | AAA ATPase | VFG0079 | Protein | 4e-172 | 46 |
