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Name : TDE0107 (TDE0107) Accession : NP_970724.1 Strain : Treponema denticola ATCC 35405 Genome accession: NC_002967 Putative virulence/resistance : Unknown Product : alpha-amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 126731 - 128356 bp Length : 1626 bp Strand : - Note : identified by match to protein family HMM PF00128 DNA sequence : ATGGAATGGTGGAATAAAAGGGTTTTTTATCAGATATATCCCAGAAGTTTTTGTGATGCAAACAATGACGGGATGGGGGA CATTCAGGGTATTATCTCAAAATTGCCTTATTTAAAGGAACTGGGTATAGGGGCAATTTGGCTTTCTCCCGTAACCGCAT CCTCCGATTATGATAACGGCTATGATGTTTCCGATTATTGCGATATCAACCCCAAATTCGGCACAATGGATGACTTTAAG TCTCTATTAAAAGAAGCGGATAAACTGGATATAAAAATTGTGATGGACTTGGTTATAAACCATACAAGCGATCAGCATAG GTGGTTTATCGAATCTAAAAATCCCGAATCTCCCTACCATAATTATTATGTTTGGAAAGAGCCTAGGCTTGTAAAGGGTA AAAAGCTGCCTCCCAATAATTGGGACAGCCTTTTTTTAGGTTCTGCATGGAAGTATTGTGAAGAAAACGGCCTCTATTAT CTTCACCTTTTTACCGAAAATCAGCCGGATCTAAACTATAACAATCCCGCGGTTACTGAAGAAGTAAAAAAGATATTGAA GTTTTGGCTGGATATGGGTGTTGCGGGCTTCCGCTGCGATGTTATAAACTGTATTTATAAAACCTCTTACGAGGATGCAA AAAAAAGAAGGATTAAAACAGGCAAAGAGTTTTATCTTTCTCAAAAGGGATGCCATGATATTCTAAAAGAATTAAATAGA GATGTCCTAAAACCCTACAATGCCTTTACAGTAGGCGAAACTATGGACGTTTCTTTAGAAGAAGCTAAAGATTTTATTCA GGACGAATTGACTCTTGTTTTTCCTTTTGAACATCACACCGGGGTAGACTGCTGGTTTCAAATTCCGGTTTTAAAACGGA AATATAAGCCTTTCCGAATGATTAAAATCTTAAAAAAATGGCAGACTAAAATGCCATGGACTCCTCTTTTCTTTGAAAAT CACGATCAGGCACGTTCTGTTTCGCGGTTTGGGGATGAGGGAAAATACTACAAAGAAAGCGTCAAAATGCTTGCAACCGT GCTTTTGACCCAAAAAGGAACCCCCTTTATTTATCAAGGGCAGGAAATTGGGCTTACTAATACCGATTTTAAAAGCATGG ATGAAATCGACGATATAGCCACAAAGAATATTTATGACACTCTCCGCCGTCTTAAATTCGGTAAAAAACGGGCCTTTAAA ATGACAATGAACTATGCCCGGGACCATGCAAGAACTCCCATACCGTGGGATGATTCCGAAAACGGGGGCTTTTGTACCGT AAAGCCTTGGCTGCGGCTTAACGAAAAATATAAAGAAATAAATGTAAAGAAGAATCTATCGGAATCCGATTCCTGCTTTA ATTATTATAAGAAACTGATAGCCTTAAGAAACGAGGAAGAAGTCTTACAGCTCGGCGATATAGAATTTGCGGATTTGGGA AAGGATATTTTTGCATATTATCGCAAAAAAGGCGATAAAACTTTTTTTATTGTTTCCAATATGTCAGGCAAGGCTCAGAA GATAAGGGAAGAGGTCAGAGGTCTTCCGATTCTATTTAATTATAGAAACTTTAACCCTCAACAGAAGATTTTACGTCCCT TTGAGTCTGTAATTACAAGAATTTAG Protein sequence : MEWWNKRVFYQIYPRSFCDANNDGMGDIQGIISKLPYLKELGIGAIWLSPVTASSDYDNGYDVSDYCDINPKFGTMDDFK SLLKEADKLDIKIVMDLVINHTSDQHRWFIESKNPESPYHNYYVWKEPRLVKGKKLPPNNWDSLFLGSAWKYCEENGLYY LHLFTENQPDLNYNNPAVTEEVKKILKFWLDMGVAGFRCDVINCIYKTSYEDAKKRRIKTGKEFYLSQKGCHDILKELNR DVLKPYNAFTVGETMDVSLEEAKDFIQDELTLVFPFEHHTGVDCWFQIPVLKRKYKPFRMIKILKKWQTKMPWTPLFFEN HDQARSVSRFGDEGKYYKESVKMLATVLLTQKGTPFIYQGQEIGLTNTDFKSMDEIDDIATKNIYDTLRRLKFGKKRAFK MTMNYARDHARTPIPWDDSENGGFCTVKPWLRLNEKYKEINVKKNLSESDSCFNYYKKLIALRNEEEVLQLGDIEFADLG KDIFAYYRKKGDKTFFIVSNMSGKAQKIREEVRGLPILFNYRNFNPQQKILRPFESVITRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-94 | 43 |
