Gene Information

Name : SAS0476 (SAS0476)
Accession : YP_042604.1
Strain : Staphylococcus aureus MSSA476
Genome accession: NC_002953
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 546794 - 547681 bp
Length : 888 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGAGTAAAATTATTGGATCAGACAGAGTCAAAAGAGGTATGGCTGAAATGCAAAAAGGCGGCGTTATTATGGATGTCGT
TAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTA
GAGCTGCTGGTGGCGTTGCACGTATGGCAAACCCTAAAATTGTAGAAGAAGTAATGAATGCTGTTTCTATTCCAGTCATG
GCTAAAGCACGTATTGGTCATATCACTGAAGCAAGAGTATTAGAGGCGATGGGTGTTGACTATATTGATGAATCAGAAGT
GTTAACACCAGCAGATGAGGAATATCACTTAAGAAAAGATCAATTTACAGTACCATTTGTATGTGGATGTCGTAATTTAG
GTGAAGCTGCGCGTAGAATTGGTGAAGGTGCTGCTATGTTACGTACTAAAGGTGAACCAGGTACAGGTAATATTGTTGAA
GCTGTAAGACATATGAGACAAGTTAATTCAGAAGTTAGTCGATTGACTGTAATGAATGATGATGAGATTATGACTTTTGC
GAAAGATATCGGTGCGCCTTATGAAATTTTAAAACAAATTAAAGACAATGGTCGTTTACCGGTAGTTAACTTTGCAGCTG
GTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTT
AAATCAGAAGATCCAGAAAAATTTGCTAAAGCAATTGTTCAAGCAACAACACATTACCAAGACTATGAGCTAATTGGAAG
ATTAGCAAGTGAACTTGGCACTGCTATGAAAGGTTTAGATATCAATCAATTATCATTAGAAGAACGTATGCAAGAGCGTG
GTTGGTAA

Protein sequence :
MSKIIGSDRVKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVM
AKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVE
AVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPYEILKQIKDNGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIF
KSEDPEKFAKAIVQATTHYQDYELIGRLASELGTAMKGLDINQLSLEERMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 5e-80 61
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-80 61
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-80 61