|
Name : SAS0047 (SAS0047) Accession : YP_042176.1 Strain : Staphylococcus aureus MSSA476 Genome accession: NC_002953 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : K : Transcription COG ID : COG2378 EC number : - Position : 55960 - 56889 bp Length : 930 bp Strand : + Note : Similar to Bacillus halodurans hypothetical protein BH1889 SWALL:Q9KBN6 (EMBL:AP001513) (325 aa) fasta scores: E(): 5.2e-16, 25.71% id in 315 aa, and to Listeria monocytogenes hypothetical protein LMO0364 SWALL:Q8YA03 (EMBL:AL591975) (314 aa) fasta scores DNA sequence : ATGAAAAAATCTGTTAGATTATATCATATGATTGAATACTGTAATGAAAAAAGGAATTTCAAGTTAAATGATTTAATGTC AGAATTTAATATTTCTCGTAGTACTGCTTTAAGGGATATAAAGGAAATTGAAGCATTAGGAGTGCCTTTATATAGTAGTA CAGGGAAAAATGGCGGTTATATGACCATAGGTAATCGAAACCAAACGAAAATAGCAATCACAGACGAAGAATTGAAAGCT TTAGTATTTACACTTTCAAGTATCTCCAATGTTAGTAAGTTACCTTTTCAAACAGAATATCAAGAAATATTAAAAAAGTT ATATAATAATTCGAATAAAAAAGAATTGATAAACCAGTATAATGAGATATTTCAATATTTTAATGAAGATACATATCAGT TCAAAAGTTATAAGATATTTAATGAAATCATTAGATTAACAATTGGTAGTAAGTCATTTAAAATCTGTTATTCACAAAAC TATTTGAAAGAACAATATAAAGGTATTGGTATCTTATATAAAAATCAACAATGGTACTTCGTTGTTGTTAATATAGCATC AAAATTAGTAAAGTTGTTAAACATTTCTAAAATAAAAGAAGTATATGAAATGGGAGAAACTAAAGAATGTAATGAAATAA CTATGCAGAATTTTCAACAGTTTATGGTTGAAAACGAAAATACGATTGATATACAAATTAGAAGTAATATTATTGGATTA AATATCTTGAAAGGATACTTGTGGAGTGACTATATGATTGAAAATATTAACGAAGAGACATATTTGTTTAAATCAAAAGT GAACATGCAAGATATAAATTTTATAGCTAAATTAATAGTCACATGTGGTGCCAATGTCAAAGTAGAATTTCCTATTAGTT TGAAAAAAGCTATTAAAACTGAACTAACCAAAATAATAAACTTATACTAA Protein sequence : MKKSVRLYHMIEYCNEKRNFKLNDLMSEFNISRSTALRDIKEIEALGVPLYSSTGKNGGYMTIGNRNQTKIAITDEELKA LVFTLSSISNVSKLPFQTEYQEILKKLYNNSNKKELINQYNEIFQYFNEDTYQFKSYKIFNEIIRLTIGSKSFKICYSQN YLKEQYKGIGILYKNQQWYFVVVNIASKLVKLLNISKIKEVYEMGETKECNEITMQNFQQFMVENENTIDIQIRSNIIGL NILKGYLWSDYMIENINEETYLFKSKVNMQDINFIAKLIVTCGANVKVEFPISLKKAIKTELTKIINLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0047 | YP_042176.1 | hypothetical protein | Not tested | SCC476 | Protein | 1e-138 | 100 |
| unnamed | ACL99839.1 | hypothetical protein | Not tested | Type-V SCCmec | Protein | 9e-124 | 86 |
| SAPIG0045 | YP_005732855.1 | HTH domain family | Not tested | Type-V SCCmec | Protein | 1e-123 | 86 |
| SH0050 | YP_251965.1 | hypothetical protein | Not tested | SCCmec | Protein | 1e-123 | 86 |
| unnamed | BAG06203.1 | hypothetical protein | Not tested | Type-VII SCCmec | Protein | 4e-124 | 86 |
