|
Name : SAS0025 (SAS0025) Accession : YP_042158.1 Strain : Staphylococcus aureus MSSA476 Genome accession: NC_002953 Putative virulence/resistance : Unknown Product : type I restriction enzyme protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 34546 - 37584 bp Length : 3039 bp Strand : - Note : N-terminus is similar to the N_terminal region of Escherichia coli type I restriction enzyme EcoR124II R protein HsdR or Hsr SWALL:T1R1_ECOLI (SWALL:P10486) (1033 aa) fasta scores: E(): 2.1e-05, 22.57% id in 762 aa. Full length CDS is similar to Caulobact DNA sequence : GTGATATCAGTGATAAAAAATAAAGAAATTAATTTTGAACAAGATATAGAAGCGAGTCTAGTTCAGTACGGGGGATGGGA GTCAGTAAGATTTCAAGATACTCATTACGATGCAAATATCGCACTCGATCCAACAGTATTATTAGAATTTGTAAAACAAA CTCAACCAAAAAATTGGAAGCGATACGTATCAATCTATCGTACAAATGCAGAACAGAAGTTTTTAAAACGACTAAATGAA GAAATCACAAATCACGGCATCTTACATGTCCTTCGTAAAGGTATCAGAGATCGAGGAGTCTCTTTTAAAGTTGTTTACTT TCAACCTGCATCATCTTTAAATACAGAAAATATAAAAAATTATGAAGCTAATCGTTTTCAATGTGTGCGACAATTTCAAT ATAGTAATAAGTATAGAAACACTATTGATATGGTGTTAATGATTAATGGGATTCCTCTTGTTGCATTAGAACTTAAAAAT CAATATACAGGCCAAAATGTGGAACATGCGAGATTACAATTTGAACAAGATAGAGATCCAAAGGAATTAATTTTTCAATT TAACTCTCGATTCTTAGTCTATTTTGCAGTAGATCATTTTAATGTGTTAATGACAACAAAACTCGCAAAAGGGAACACTT ACTTTCTGCCATTCGATCAAGGATCTAATGGTCCTGGTCGTGTTGGAGGTGCAGGAAATCCATCTAATCCATCTGGATAC CCTACTTCTTATTTATGGGAGAATGTACTCACAAGCTATCAATTATTGGATATTTTTGAAAGGTTTATGAATTTAGAAGA AAAGAAAAAACTACTAATTTTTCCACGTTATCACCAACTGGATGTTGTGAAAAAATTAATATCAGATACTCAGCACCATG GTCCTGGAAAGAATTATCTCATTCAACATTCTGCTGGTTCGGGTAAGTCTAATAGTATTGCTTGGTTGGCATACCATCTC GCTTCCTTGCATAGTAATGAGGATCAACCAATCTATTCATCGGTCATTGTTGTTACAGACCGTACTGTTTTAGATCGCCA ACTTCAAAATACATTAATGAGTTTCGAGCATACTGTTGGGCAAGTCGAAACTATTGGAGATAATAAAACTTCTCAAGATT TAAAAACAGCTATAAATGACCAAAAGAAAATTATTATTACTACATTACAGAAGTTCCCAGTAATTTATGATGAAATAGAT AATACAGCAGGTAGAAGTTTTGCGATTTTGGTCGATGAAGCGCATTCTTCTCAAACAGGAAGCAGTGCACAAAAATTAAA ACATGCGTTAGCAGACAAAGAAGCTTCTTTAAAGGAATACCAAGAATTTGAAGAAAGCGTTGAAGATCAATCGCTAGATG ACCAAGATCAAATTGTTCAAACATTACTGTCCCAAGGTCAACACGACAACTTAAGTTTTTTTGCTTTTACAGCTACACCG AAAGAGAAAACGATTGAAATGTTTGGAACAAAACAAGCAGATGGGTCCTATCATCCATTTCATATTTATAGTATGAGACA AGCCATTGAAGAAGGATTTATTCTAAACGTTTTACAAAATTATATGACATACAACACTTCCTATAAAATTGCGAAATCGA TTGAAGAAGACCCAGAATTGCCAAAAACAGAAGCAGTTCGAGCTATCGCTAAATATCAATCTCTTCATCCTTGGGTACTT AGACAAAAAGCCGAGATTATGATTGAACAATTTAGATCAGTGACACAAAAAGCAGTCCAAGGTAGAGGAAAGGCAATGAT TGTGACAGCTTCACGACTCCACGCCGTACGGTATATGCAAGAGTTCAAAAAGTACATCAAAGAAAAAGGATACACGGATA TGGATGTGTTAGTCGCTTTTTCAGGTACTGTAGAAGATGATGGAATTGAATATACAGAGCCGAAGATGAACTTAACACAT TCTGGAGAACGCATCCAAGAAAATCAACTGAAAGAAGCATTTCATAGTGAAGACTTTAATTTATTAATTGTCGCAGAAAA ATACCAAACGGGATTTGACGAACCTTTACTTCATACAATGTTTGTCGATAAGAGATTACGCGGAGTAAAGGCAGTCCAAA CATTGTCTCGCCTCAATCGTACTATGCCTGGAAAAACAGATACTTTTATTCTTGATTTTGTAAATACAGCAGAAGAAATA TATGAAGCATTCCAACCTTTTTACGAAGCAACTTCTCTAAAAGAAGAAATTAATATTAATTTAATTTATGATACACAGAG TAAACTACGTAAATTCCATATATACAATGATGATGATATTCAAACAGTAATGAAATTAAATCGTCAAGCAAAACAAAAGC AAAATGATCAATTACTTGGTCGATTGAGTAGCGTGTTACGCCCCGTTATTAGTAGATACAGTGACCTACCAGAAGATGTT CAATACGATTTCAGAGTTACACTAAGGAACTTCAACAAATGGTATAACTATATCGCTCAAATTGATCGTACTTTTGATAA AGAGTTACTAGAAGAAAGTATTTTCACTGGTTTCTTGTTAAAATTTATTCCTGAAAAACAACGCAACTATATCGATATTG AAGACAAAGTAAAGTTAGAATACTATAAATTGCAGGAAGATTTCAAAGGAGATATAGCACTCGTCAATGAAGATGTAGAA AATGGGCAATTGGCTCATCCTTCAGAAGTGAATGCAACTGTTAGACCTGAAGAAGAATACGATTCTTTAAATGAAATTAT ACACAAAATCAATGAACGTTTTCCAAATGATTTTACTCAAGGCGATAGAGTACTCGTTAAAAACATGCGAGAAACATTGA TAAACAATACAGATGCGAAACTTGTAAATATGGCTCAAAACAACAGCGAAGAAATGTTTGCGAATAGTTTATTCCAACAA CAATTCCAAGACTTCTTGATTGATCAATATAATCAAGGAGAAGCTGCATACTCTAAAATGTTTAGCAATAATAGAGACTT TTATGACACTGTCTATCAACTACTAGCAAAAGATTATTATAGATGGCTACGATCACAAAAAGCAGATAATTTTGCTTAA Protein sequence : MISVIKNKEINFEQDIEASLVQYGGWESVRFQDTHYDANIALDPTVLLEFVKQTQPKNWKRYVSIYRTNAEQKFLKRLNE EITNHGILHVLRKGIRDRGVSFKVVYFQPASSLNTENIKNYEANRFQCVRQFQYSNKYRNTIDMVLMINGIPLVALELKN QYTGQNVEHARLQFEQDRDPKELIFQFNSRFLVYFAVDHFNVLMTTKLAKGNTYFLPFDQGSNGPGRVGGAGNPSNPSGY PTSYLWENVLTSYQLLDIFERFMNLEEKKKLLIFPRYHQLDVVKKLISDTQHHGPGKNYLIQHSAGSGKSNSIAWLAYHL ASLHSNEDQPIYSSVIVVTDRTVLDRQLQNTLMSFEHTVGQVETIGDNKTSQDLKTAINDQKKIIITTLQKFPVIYDEID NTAGRSFAILVDEAHSSQTGSSAQKLKHALADKEASLKEYQEFEESVEDQSLDDQDQIVQTLLSQGQHDNLSFFAFTATP KEKTIEMFGTKQADGSYHPFHIYSMRQAIEEGFILNVLQNYMTYNTSYKIAKSIEEDPELPKTEAVRAIAKYQSLHPWVL RQKAEIMIEQFRSVTQKAVQGRGKAMIVTASRLHAVRYMQEFKKYIKEKGYTDMDVLVAFSGTVEDDGIEYTEPKMNLTH SGERIQENQLKEAFHSEDFNLLIVAEKYQTGFDEPLLHTMFVDKRLRGVKAVQTLSRLNRTMPGKTDTFILDFVNTAEEI YEAFQPFYEATSLKEEININLIYDTQSKLRKFHIYNDDDIQTVMKLNRQAKQKQNDQLLGRLSSVLRPVISRYSDLPEDV QYDFRVTLRNFNKWYNYIAQIDRTFDKELLEESIFTGFLLKFIPEKQRNYIDIEDKVKLEYYKLQEDFKGDIALVNEDVE NGQLAHPSEVNATVRPEEEYDSLNEIIHKINERFPNDFTQGDRVLVKNMRETLINNTDAKLVNMAQNNSEEMFANSLFQQ QFQDFLIDQYNQGEAAYSKMFSNNRDFYDTVYQLLAKDYYRWLRSQKADNFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0025 | YP_042158.1 | type I restriction enzyme protein | Not tested | SCC476 | Protein | 0.0 | 100 |
