Gene Information

Name : SAS1887 (SAS1887)
Accession : YP_044001.1
Strain : Staphylococcus aureus MSSA476
Genome accession: NC_002953
Putative virulence/resistance : Unknown
Product : capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2046007 - 2047254 bp
Length : 1248 bp
Strand : -
Note : Almost identical to Staphylococcus aureus phage phi 13 head protein SWALL:Q8SDK8 (EMBL:AF424783) (415 aa) fasta scores: E(): 1.8e-134, 99.75% id in 415 aa

DNA sequence :
ATGAAAACAAAAGAAGAGTTACAATCTGAGATTTCAGACATTAAAAGACAAATTGATTTAAAGGTGAAGTATGCAACGAG
AGCACTTAATAACGATGAGTTAGAAAAAGCAGAAAAATTAGAACAAGAAATTACTGATTTACGTTCTCAAATCCAAGAAA
AACAAGAAGAATTAGATAAGCTAAAAGAAAAAGATGGAACTTCAGAAAACAATCAACAATCAGTGGAAGTAAACGAAGCA
CGTACTTATCGAAACCAAGCAAACATTAATGATTTAGGTATTTCGATTCAAAACACAAAGGTAACATCACAAGAAGTTAG
AGATTTTACTGAATATCTTGAAACACGCAATGATATTCAAGGTGGTTCGTTAAAAACAGACTCAGGATTTGTAGTTATTC
CAGAGGAAATTGTTACAGATATTTTAAAATTAAAAGAGGTTGAGTTTAATCTTGATAAGTATGTGACGGTCAAACGTGTT
ACAAATGGTTCTGGTAAATATCCGGTAGTACGACAATCAGAAGTTGCAGCCCTTGAAAAAGTTGAAGAATTAGAAGAAAA
CCCTGAATTAGCAGTTAAACCATTCTTCCAATTAGCATATGACATTAATACACACCGTGGTTACTTCCGAATTTCACGTG
AAGCAATCGAAGATGCAAAAGTGAATGTTTTGCAAGAATTGAAACTATGGATGGCGCGAACTATTGCAGCAACACGAAAC
AAAGCAATTATTGATGTTATCACTAAAGGATCAACGGGTTCTACAAGTTCAGGTTTTGAAAAAGAAGGTAAGAAATTAGA
AGTTAAAAAAGCAAAATCTTTAGATGATATTAAAGATGCTATTAACCTGAATGTTAAGCCAAATTACGAACATAATGTTG
CGATTGTTTCGCAAACTATGTTTGCAAAATTAGACAAAATGAAAGATAAGCTAGGAAACTATTTAATCCAGCCAGATGTT
AAAGAAAAAACGCAACAGCGTTTATTAGGAGCTAAAATCGAAATTTTACCTGATGAAGTACTAGGGCAAAAAGGTAATAA
CACTTTGATTATCGGTAACTTAAAAGATGCGATTGTTTTATTTGACCGCTCTCAATACCAAGCATCATGGACTGACTACA
TGCATTTCGGAGAATGTTTAATGATTGCTGTACGTCAAGACTGTAGAATTCTAGATTATAAATCAGCAATTGTGATTGAA
TATGATGATAGTGAACGCGGTGAAGGCGATCTTGGCTTAGAAGCATAA

Protein sequence :
MKTKEELQSEISDIKRQIDLKVKYATRALNNDELEKAEKLEQEITDLRSQIQEKQEELDKLKEKDGTSENNQQSVEVNEA
RTYRNQANINDLGISIQNTKVTSQEVRDFTEYLETRNDIQGGSLKTDSGFVVIPEEIVTDILKLKEVEFNLDKYVTVKRV
TNGSGKYPVVRQSEVAALEKVEELEENPELAVKPFFQLAYDINTHRGYFRISREAIEDAKVNVLQELKLWMARTIAATRN
KAIIDVITKGSTGSTSSGFEKEGKKLEVKKAKSLDDIKDAINLNVKPNYEHNVAIVSQTMFAKLDKMKDKLGNYLIQPDV
KEKTQQRLLGAKIEILPDEVLGQKGNNTLIIGNLKDAIVLFDRSQYQASWTDYMHFGECLMIAVRQDCRILDYKSAIVIE
YDDSERGEGDLGLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1904 NP_646721.1 capsid protein Not tested ¥ÕSa3 Protein 5e-158 100
SAOV_1927c YP_005737371.1 Phage capsid protein Not tested ¥ÕSa3 Protein 5e-156 99