Gene Information

Name : SAR0643 (SAR0643)
Accession : YP_040085.1
Strain : Staphylococcus aureus MRSA252
Genome accession: NC_002952
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 689546 - 690289 bp
Length : 744 bp
Strand : -
Note : Similar to Treponema pallidum zinc transport system ATP-binding protein TroB SW:TROB_TREPA (P96117) (266 aa) fasta scores: E(): 1e-25, 41.346% id in 208 aa, and to Staphylococcus epidermidis iron repressible ABC transport system ATP binding protein TR:P72

DNA sequence :
TTGTTAGAAACAAAAGATTTAAATCTGTTTTTAGGTAATAAGCATGTACTTAAAAACATTTCCTTATCGATACCAGTACG
CGGCGAAATAATTGGTATCATGGGCCCGAATGGTGCTGGTAAATCTTCCCTTATCAAGTCTTTAATTGGTGAATTTAATG
CTACCGGTACTAAATTGTTACATAACAAACCTATACAACAACAACTGCAACATATTACATATATTCCACAAAAAGCACAT
ATTGATTTAGATTTTCCTATAAGTGTGGAACAAGTGATTTTATCAGGTTGCTACAAAGAAATTGGATGGTTTAGACGACC
TAATAAATCAGCAAGGGATAAACTCAAACAGTTATTAAGCGATTTAGAATTAGAATCTTTACGTCATCGACAAATTTCAG
AATTAAGTGGTGGACAATTACAACGTGTGCTAGTAGCGAGAGCATTGATGTCCGAAAGTGAAGTTTATTTTCTAGATGAG
CCGTTTGTCGGAATTGATTTTAGTAGTGAAAAATTAATCATGACAAAAATCGAGAACTTAAAACAACAAGGAAAACTTAT
TCTTATCATCCACCATGATTTATCAAAAGCAAAGCAATACTTTGATCGCATTATTCTATTAAATCAAACATTACGATACT
TTGGTGATAGTGAAGAGGCTATGAGTGTCACTCGCTTAAACGAAACATTTATGAGTAGCACTGACTGTAGTGACCCTAGT
CAAAGGAGCAATATAACATGTTAG

Protein sequence :
MLETKDLNLFLGNKHVLKNISLSIPVRGEIIGIMGPNGAGKSSLIKSLIGEFNATGTKLLHNKPIQQQLQHITYIPQKAH
IDLDFPISVEQVILSGCYKEIGWFRRPNKSARDKLKQLLSDLELESLRHRQISELSGGQLQRVLVARALMSESEVYFLDE
PFVGIDFSSEKLIMTKIENLKQQGKLILIIHHDLSKAKQYFDRIILLNQTLRYFGDSEEAMSVTRLNETFMSSTDCSDPS
QRSNITC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-41 44
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-41 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAR0643 YP_040085.1 ABC transporter ATP-binding protein BAC0400 Protein 4e-42 42