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Name : SAR0366 (SAR0366) Accession : YP_039823.1 Strain : Staphylococcus aureus MRSA252 Genome accession: NC_002952 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 410176 - 411390 bp Length : 1215 bp Strand : - Note : Similar to bacteriophage phi PVL, and Staphylococcus aureus temperate phage phiSLT, integrase TR:O80068 (EMBL:AB009866) (401 aa) fasta scores: E(): 2e-52, 38.765% id in 405 aa, and to bacteriophage bIL312 integrase Int TR:Q9AZF9 (EMBL:AF323673) (382 aa) f DNA sequence : ATGTGGGTTCGTGAAATCACCAAAAACAATAGTACGGCCTATCGCTATTTAGAGCGCTATACAGACCCTTTAACTGGCAA GTATAAAACAGTATCAGTTACACGTAACAAGAATAATGTACGTAGCCAAAAGGACGCTCAATTAGAATTAAATAAAATAA TTGAGCAACGTTTGAAACATTACAGTACGAAACAACTTGAAAACTTAACGTTCCATGATGCGTGCGATGAATGGTTAGAG CATTACAAGACACATTCAGGCTCGAAACCAACCACTATTAAAGAAAAGAAAAGTAATACTAATACAGTTAAAAATGCTAT TGATAGCAAAGTACTCATCAGCAAGATTACGCACACCTACTTACAAAACATCATTAATGAATGGGCTAAATCACATAGTA TTGGCCATGTTCAATCTCTTGTTATTGTTATTCGTTCCGTTTTCAAATATGCGTTTAAATATTATGATCTGCACGATATT AGTGTGTTAGATAAAATAGATATACCTAAGAAAGCCCAAACCAGAAACGAGTTTCAAGCTAAACGTAATAACTATTTAGA AGATAGCGAAGTAAAGGAGTTACTAGAGTGCTTCGACTATCTAATTAAACATAAGCGTCATGCTACGCGTAAACGTAACT ATGAAATGGTAAAAGCATTAGTAGAATTTCAAATTAACAATGGAATGCGCATTGGCGAACTCCTAGCAATCAAGACAGAC AATGTAGACGTGGAGAATAAAACACTAGAGATTGATGGCACAATTAACTGGGTTACAGATGTAGTAACTGGAGCATTTGG AGTGAAAGAAACGACTAAGACGAGTAAGAGTTATCGAACAATAGGCCTCACAGCTCAAAGTATTAATTTACTTAAAAAAC TCATGCTAGAAAATAAAAAAGAGAATCAGTGGAATGATAAATTCATAGATAGAGGTTATATATTTACTAACACTGCTGGT AGCCCTATTGACTTAAATAAGGTGAATAATATTATTAAAGAAGCTACTGATATAAGTTCAATTAACAAGCGTGTGACAAC GCACACATTACGTCACACACACATATCTACACTTGCGCAATTAGGAATTAACCTAAAAGCGATACAAGAGCGTGTAGGTC ACTCGGACTATAAAACCACCTTAGAGATATACACACATGTTACTGATAAGATGGCAAAAGATATGATGAATAAATTAGAG GGGATAGGGAGTTAG Protein sequence : MWVREITKNNSTAYRYLERYTDPLTGKYKTVSVTRNKNNVRSQKDAQLELNKIIEQRLKHYSTKQLENLTFHDACDEWLE HYKTHSGSKPTTIKEKKSNTNTVKNAIDSKVLISKITHTYLQNIINEWAKSHSIGHVQSLVIVIRSVFKYAFKYYDLHDI SVLDKIDIPKKAQTRNEFQAKRNNYLEDSEVKELLECFDYLIKHKRHATRKRNYEMVKALVEFQINNGMRIGELLAIKTD NVDVENKTLEIDGTINWVTDVVTGAFGVKETTKTSKSYRTIGLTAQSINLLKKLMLENKKENQWNDKFIDRGYIFTNTAG SPIDLNKVNNIIKEATDISSINKRVTTHTLRHTHISTLAQLGINLKAIQERVGHSDYKTTLEIYTHVTDKMAKDMMNKLE GIGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0366 | YP_039823.1 | integrase | Not tested | SaPI4 | Protein | 1e-178 | 100 |
| int | AAC28969.1 | integrase | Not tested | SaPI1 | Protein | 5e-78 | 47 |
| int | AAL04148.1 | integrase-like protein | Not tested | SaPI3 | Protein | 2e-79 | 47 |
| SAAV_0787 | YP_003281710.1 | pathogenicity island protein, integrase | Virulence | SaPIAv | Protein | 1e-78 | 47 |
| SACOL0885 | YP_185756.1 | pathogenicity island protein, integrase | Not tested | vSa1 | Protein | 3e-79 | 47 |
| int | YP_493499.1 | integrase | Not tested | SaPI5 | Protein | 2e-79 | 47 |
| SAOV_0274 | YP_005735791.1 | putative prophage integrase | Not tested | ¥ÕSa1 | Protein | 4e-65 | 42 |
