Gene Information

Name : SAR2107 (SAR2107)
Accession : YP_041472.1
Strain : Staphylococcus aureus MRSA252
Genome accession: NC_002952
Putative virulence/resistance : Virulence
Product : leukocidin F subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2169572 - 2170591 bp
Length : 1020 bp
Strand : -
Note : Similar to Staphylococcus aureus leukocidin F subunit precursor LukF SW:LUKF_STAAU (P31715) (323 aa) fasta scores: E(): 2.5e-34, 40.97% id in 327 aa, and to Staphylococcus aureus prophage phiPV83 leukocidin F precursor LukF-PV TR:Q9MBN2 (EMBL:AB044554) (3

DNA sequence :
ATGATTAAACAAGTATGTAAAAATATTACAATCTGTAGTTTAGCGCTATCAACAGCTTTAACTGTATTTCCAGCATCTTC
TTATGCAGAAATTAAATCTAAAATTACTACAGTTTCCGAGAAGAACCTTGATGGTGATACGAAGATGTATACACGTACGG
CTACAACGAGTGATACAGAGAAAAAAATCTCACAAAGCTTACAATTTAATTTTCTTACTGAGCCAAATTATGATAAAGAG
ACAGTATTTATTAAGGCGAAAGGTACAATTGGCAGTGGATTGAAAATTTTAAATCCAAATGGTTATTGGAATAGTACATT
AAGATGGCCTGGTTCTTATTCAGTCTCGATTCAAAACGTTGATGATAACAACAACAGTACAAATGTGACTGATTTTGCGC
CTAAAAATCAAGATGAATCAAGAGAAGTTAAATATACGTATGGCTATAAAACAGGTGGAGATTTTTCAATTAATCGTGGT
GGTTTAACTGGAAATATTACAAAAGAGAAAAATTATTCAGAGACAATTAGTTATCAACAACCATCTTACCGCACACTTAT
TGATCAACCTACAACAAATAAAGGTGTAGCTTGGAAAGTAGAAGCACATTCTATCAATAATATGGGACATGATCATACGA
GACAACTAACTAATGACAGTGATGATAGAGTGAAAAGTGAAATCTTTTCATTAACTCGAAACGGAAACCTATGGGCGAAA
GATAATTTCACGCCTAAAAATAAAATGCCTGTAACTGTGTCAGAAGGATTTAATCCAGAATTTTTAGCTGTAATGTCACA
CGATAAAAATGATAAAGGTAAATCAAGATTTATCGTTCATTATAAACGATCAATGGATGACTTTAAATTAGATTGGAACA
AACATGGTTTCTGGGGCTATTGGTCTGGTGAAAACCATGTAGATCAAAAAGAAGAAAAATTATCAGCATTATATGAAGTT
GATTGGAAGACACATGATGTAAAATTAATTAAAACAATTAATGATAAAGAACAGAAATAA

Protein sequence :
MIKQVCKNITICSLALSTALTVFPASSYAEIKSKITTVSEKNLDGDTKMYTRTATTSDTEKKISQSLQFNFLTEPNYDKE
TVFIKAKGTIGSGLKILNPNGYWNSTLRWPGSYSVSIQNVDDNNNSTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRG
GLTGNITKEKNYSETISYQQPSYRTLIDQPTTNKGVAWKVEAHSINNMGHDHTRQLTNDSDDRVKSEIFSLTRNGNLWAK
DNFTPKNKMPVTVSEGFNPEFLAVMSHDKNDKGKSRFIVHYKRSMDDFKLDWNKHGFWGYWSGENHVDQKEEKLSALYEV
DWKTHDVKLIKTINDKEQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lukD NP_374926.1 leukotoxin, LukD Virulence vSa¥â Protein 9e-45 41
lukD YP_186707.1 leukotoxin LukD Virulence vSa¥â Protein 8e-45 41
lukD NP_646584.1 leukotoxin Virulence vSa¥â Protein 8e-45 41
lukD YP_001332752.1 leukocidin LukD precursor Virulence vSa¥â Protein 8e-45 41
lukD YP_494459.1 leukotoxin LukD Virulence vSa¥â Protein 8e-45 41
SAKOR_01767 YP_008491955.1 Leukocidin F subunit lukD Virulence vSa¥â Protein 9e-45 41
lukD NP_372343.2 leukotoxin F-subunit Virulence vSa¥â Protein 9e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAR2107 YP_041472.1 leukocidin F subunit VFG1275 Protein 1e-44 41