Gene Information

Name : tnpR (SAR1828)
Accession : YP_041214.1
Strain : Staphylococcus aureus MRSA252
Genome accession: NC_002952
Putative virulence/resistance : Unknown
Product : resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1910736 - 1911329 bp
Length : 594 bp
Strand : -
Note : Similar to Staphylococcus aureus transposon Tn552 resolvase TnpR SW:BINL_STAAU (P18358) (197 aa) fasta scores: E(): 2.1e-72, 98.477% id in 197 aa, and to Lactococcus lactis resolvase TnpR TR:Q9R778 (EMBL:X92946) (183 aa) fasta scores: E(): 2.5e-55, 79.781

DNA sequence :
TTGAAAATAGGTTATGCAAGAGTTTCAACTGGATTACAAAATCTGAATTTACAGGAGGACCGATTAAACGCATATGGTTG
TGAAAAGATATTTAGCGACCATATTAGTGGTTCAAAAAGTAAAAGACCTGGATTAGATAAAGCAATTGAATTTGCGAGAT
CAGGAGATACGATTGTTGTTTGGAGACTCGACAGACTAGGACGTAATATGGAGGATTTAATCACATTAGTTAATGAGCTT
AACGAACGAGGTGTAAGTTTCCATAGTTTAGAAGAAAATATAACGATGGATAAATCAAGTTCTACAGGACAATTATTATT
TCATTTATTCGCAGCGTTTGCAGAATTTGAACGAAATTTAATTTTAGAACGTTCTTCAGCTGGCCGAATTGCAGCACGTG
CTAGAGGACGCTATGGAGGTAGACCCGAAAAATTAAATCAAAAAGATTTAAACTTACTTAAGACACTTTATGATAATGGC
ACGCCAATTAAGACAATTGCAGAGCAGTGGCAAGTTTCACGTACAACGATTTATCGTTACCTCAATAAATTGGAGGAAAA
GGAAGATGAAAAACAAGGAGAAGTATCTAACTAA

Protein sequence :
MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFSDHISGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNEL
NERGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNQKDLNLLKTLYDNG
TPIKTIAEQWQVSRTTIYRYLNKLEEKEDEKQGEVSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 2e-67 97
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 2e-67 97
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 5e-63 94
res AGF35059.1 resolvase Not tested SGI1 Protein 4e-27 54
res AGK06929.1 resolvase Not tested SGI1 Protein 4e-27 54
res AGK06966.1 resolvase Not tested SGI1 Protein 4e-27 54
res AGK07012.1 resolvase Not tested SGI1 Protein 4e-27 54
res AGK07070.1 resolvase Not tested SGI1 Protein 4e-27 54
res AAK02044.1 resolvase Not tested SGI1 Protein 4e-27 54
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 4e-27 54
res AGF34985.1 resolvase Not tested SGI1 Protein 4e-27 54
res AGF35025.1 resolvase Not tested SGI1 Protein 4e-27 54
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 3e-27 48
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 6e-19 41
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 9e-19 41
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 9e-19 41